Protein Alignment Hnf4 and nhr-291

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_001123077.1
• Gene: nhr-291 / 6418820
• WormBaseID: WBGene00045515
• Length: 291
• Species: Caenorhabditis elegans
• Alignment Length: 231
• Identity: 62/231 - (26%)
• Similarity: 104/231 - (45%)
• Gaps: 18/231 - (7%)

  Fly   148 GSGTNSSQQQL--------QQQQQQQSPTVCAICGDRATGKH-YGASSCDGCKGFFRRSVRKNHQ 203
            |:....:|:.|        |....:.:...|::||....|.| ||..:|..|..||||::...:.
 Worm    12 GTSMYKNQKHLCVIPLVFPQMSNSETTSDCCSVCGGAPNGGHRYGPMACLSCITFFRRAISSGNV 76

  Fly   204 YTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRTSNDDPD-PGNGLSVIS 267
            ..|:....|.::.:.:|.||.|||:||...||..:|:|: ||.|..|....||.| ..:.|..:.
 Worm    77 GDCKKQSACEINHESKNSCRSCRLQKCLNVGMNPKAIQH-RDPIGQRSPPKDDSDSQKSDLQFLL 140

  Fly   268 LVKAENESRQSKAGAAMEPNINEDLSNKQF--ASINDVCESMKQQLLTLVEWAKQIPAFNELQLD 330
            .::.:...|..|.|..::   |:....||:  |:.:|:..:|.......:.||....||..|...
 Worm   141 DLQKKQRIRNQKYGIQLK---NDRSVKKQYRPANADDIRLTMSLGFQNAISWANPFEAFKNLTDS 202

  Fly   331 DQVALLRAHAGEHLLLGLSRRSMHLKD--VLLLSNN 364
            ::.|::.......:|:..:.:|....|  |.||.||
 Worm   203 EKAAVMSEFGVAFVLIEQAFKSAKEADEGVWLLQNN 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	27/75 (36%)
		NR_LBD_HNF4_like	264..494	CDD:132729	23/105 (22%)
nhr-291	NP_001123077.1	NR_DBD_HNF4A	42..117	CDD:143518	27/75 (36%)
		HOLI	179..>277	CDD:214658	15/60 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910