Protein Alignment Hnf4 and dsf

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Alignment Length: 676
• Identity: 122/676 - (18%)
• Similarity: 178/676 - (26%)
• Gaps: 358/676 - (52%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCR----FARNCVVDKDKRNQCRYCRLRKC 230
            |.:||||::|||||..|||||.|||:||:.:|..|||:    ....|.|||..|||||.|||.||
  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77

  Fly   231 FKAGMKKEAVQNER--------------------------------------------------- 244
            |::.|.|:|||:||
  Fly    78 FQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHAAV 142

  Fly   245 ----------------------------------------------------------------- 244
                                                                             
  Fly   143 AAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAGHL 207

  Fly   245 ----------------------------------------------------------------- 244
                                                                             
  Fly   208 HHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAEAA 272

  Fly   245 --------------------DRISCRRTSN--------DDPDPGNGLSVIS-------------- 267
                                ...|..:||:        ..|.|.|.:..||
  Fly   273 SKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEGLS 337

  Fly   268 ------LVKAENE---------------------------------SRQSKAGAAMEP------- 286
                  .|..|.|                                 ||.|.:.|...|
  Fly   338 LGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHASLMI 402

  Fly   287 ----------NINEDLSNKQFASIN-------------------------------------DVC 304
                      |.|.:..:||.:..:                                     |.|
  Fly   403 CASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPDKC 467

  Fly   305 ESM------------KQQLL-------------------TLVEWAKQIPAFNELQLDDQVALLRA 338
            :.:            .||||                   ..|.|.|.:..|..|..:||..||:.
  Fly   468 QELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLLQE 532

  Fly   339 HAGEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGID 403
            ...|..||.|::.::.|....:|.:..:..|...|       :.::...:.|.|::...:.:..|
  Fly   533 SWKELFLLNLAQWTIPLDLTPILESPLIRERVLQD-------EATQTEMKTIQEILCRFRQITPD 590

  Fly   404 DTEFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSI 468
            .:|..|:||:..|.|...||.:...::.|:.|....|.|::..|......|||.:||:||.|::|
  Fly   591 GSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTI 655

  Fly   469 TWQMIEQIQFAKIFGVAHIDSLLQEM 494
            ....||.:.|.:..|...|..||::|
  Fly   656 RAATIEALFFKETIGNVPIARLLRDM 681

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	46/279 (16%)
		NR_LBD_HNF4_like	264..494	CDD:132729	69/367 (19%)
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	46/84 (55%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	50/210 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D34630at7147
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24083
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.020