Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
Alignment Length: | 544 | Identity: | 147/544 - (27%) |
---|---|---|---|
Similarity: | 235/544 - (43%) | Gaps: | 158/544 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 DSSASRTASSDESESHIMHADALASAYPAASQPHSPIGLALSPNGGGLGLSNSSNQSSENFALCN 114
Fly 115 GNGNAGSA--------GGGSASSGSNNNNSMFSPNNNLSGSGSGTNSSQQQLQQQQQQQSPTVCA 171
Fly 172 ICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMK 236
Fly 237 KEAVQNERD--------RISCRRTSNDDP---------------------DPGNG---------- 262
Fly 263 --LSVISLVKAENESRQSKAG------------AAMEPNINEDLSNKQFASINDVCESMKQQLLT 313
Fly 314 LVEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLS--------------------------RRS 352
Fly 353 MHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFACIKALVFFD 417
Fly 418 PNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQFAKIF 482
Fly 483 GVAHIDSLLQEMLLGGELADNPLP 506 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 48/74 (65%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 61/267 (23%) | ||
usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 47/75 (63%) |
NR_LBD_RXR_like | 237..480 | CDD:132741 | 58/255 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45444773 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D389616at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24083 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |