Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001368290.1 | Gene: | nhr-274 / 189825 | WormBaseID: | WBGene00021522 | Length: | 417 | Species: | Caenorhabditis elegans |
Alignment Length: | 443 | Identity: | 104/443 - (23%) |
---|---|---|---|
Similarity: | 169/443 - (38%) | Gaps: | 96/443 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 AGGGSASSGSNNNNSMFSPNNNLSGSGSGTNSSQQQLQQQQQQQSPTVCAICGDRATGKHYGASS 186
Fly 187 CDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRR 251
Fly 252 TSNDDPDPGNGLSVISLVKAE---------NESRQSKAGAAMEP--------------------- 286
Fly 287 ------------NINEDLSNKQFASIN----------DVCESMKQQLLTLVEWAKQIPAFNELQL 329
Fly 330 DDQVALLRAHAGEHLLL--GLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIGAR---- 388
Fly 389 ----IIDELVTVM----KDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYIS 445
Fly 446 DRQYESRG--RFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQEMLL 496 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 37/74 (50%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 55/297 (19%) | ||
nhr-274 | NP_001368290.1 | NR_DBD_HNF4A | 36..111 | CDD:143518 | 38/75 (51%) |
HOLI | 214..388 | CDD:214658 | 36/176 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |