Protein Alignment Hnf4 and nhr-222

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_503990.2
• Gene: nhr-222 / 188828
• WormBaseID: WBGene00020750
• Length: 343
• Species: Caenorhabditis elegans
• Alignment Length: 342
• Identity: 80/342 - (23%)
• Similarity: 141/342 - (41%)
• Gaps: 104/342 - (30%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRN----QCRYCRLRKC 230
            |:||...|.|::||:.|||.||.||||.:..:.|:.|.:.:.| .||...:    :|:.||.:||
 Worm    12 CSICQRPAFGQNYGSFSCDACKMFFRRCIMLDLQFECIYQKRC-FDKFTEHRRVPRCKACRFQKC 75

  Fly   231 FKAGM--------KKE--------AVQNERDRISCRRT-------SNDDPDPGNGLSVISLVKAE 272
            ...||        |.|        |:.::...::.||.       |.::|            |.:
 Worm    76 LDTGMFIRPSTLPKIESHSEHALVAILSQLSYLNARRMTVLLNKFSFENP------------KLQ 128

  Fly   273 NESRQSKAGAAMEPNINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLR 337
            :.:|:.|. ..::.:...|:|:..:....         :.|.:|:...:....:|:..|::.||:
 Worm   129 DVARRKKL-TIVDQSSAYDMSDADWRFFT---------MYTTIEFLLNLDFMEKLEHSDKMVLLQ 183

  Fly   338 AHAGEHLLLGLSRRSMHLKDVLLLSNNCVITR---H--CPDPLVSPNLDIS-----RIGARIIDE 392
            ..:.:..||..|.|::.       .||..:|.   |  .|| |:|...::|     :|.:|::.:
 Worm   184 NFSAKATLLFNSLRTVR-------GNNDRLTTPGGHEIVPD-LMSTLFNVSLSFIRQIRSRVVSK 240

  Fly   393 LVTVMKDVGIDDTEFACIKALVFFDPNAKGLNE-------PHRI--------------------- 429
            |:    ::.|.|.||..:..::|.||...||:.       |.||
 Worm   241 LI----ELEITDEEFLLVTVILFCDPAISGLSSHAISILTPLRICYTSCLFQHCQITCQKNFPTK 301

  Fly   430 ----KSLRHQILNNLED 442
                .||.|.:..|:||
 Worm   302 FVDLLSLSHVVNKNIED 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	31/94 (33%)
		NR_LBD_HNF4_like	264..494	CDD:132729	45/221 (20%)
nhr-222	NP_503990.2	ZnF_C4	12..80	CDD:197701	26/68 (38%)
		HOLI	154..314	CDD:214658	37/180 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910