Protein Alignment Hnf4 and nhr-214

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_510121.3
• Gene: nhr-214 / 188210
• WormBaseID: WBGene00011566
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 345
• Identity: 67/345 - (19%)
• Similarity: 130/345 - (37%)
• Gaps: 58/345 - (16%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQY-TCRFARNCVV---DKDKRNQCRYCRLRKC 230
            |.:|........:|...|:.|..|||||:.....: .|:.:.:|..   .:.|..:||:||..||
 Worm     7 CVVCESSTHLFKHGKYLCNSCDLFFRRSMEPWSFFGDCKHSWDCYKVSGTRKKFPKCRHCRFNKC 71

  Fly   231 FKAGMKKEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPNINEDLSNK 295
            ...|:...:          |.|...|        :|..:...:.:|:.   ..:..:|:.|....
 Worm    72 VDVGLLTVS----------RYTKFAD--------LIKYLFCLDANREH---TFLNFSISSDFDTN 115

  Fly   296 QFASINDVCESMKQQLLTL--VEWA--KQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLK 356
            .|..........|...||.  ..||  .::.|..:|:..|....|.:...::...|    :..|:
 Worm   116 NFLDEKPTRFIKKTHDLTFDCHGWAIMNKLSAIEKLRSLDFPKYLSSKDLKYFFKG----AYFLE 176

  Fly   357 DVLLLSNNCVITRHCPDPLVS-PN-LDISRIGAR------------IIDELVTVMKDVGIDDTEF 407
            .:|.::..|..   |.:.|:. |: :|:..:..:            |..:||....::.|...|.
 Worm   177 AMLTMAMRCYF---CKEDLMHFPHGVDLFPVSVQEAGKIKLNFLNLIRCQLVGKFIELKITREEI 238

  Fly   408 ACIKALVFFDPNAKGLN--EPHRIKSLRHQILNNLEDYISDRQYESRG--RFGEILLILPVLQSI 468
            ..|.|:.|.:|....|:  ..:.:...:....::|..|...: |:..|  ||..::.:|.|...
 Worm   239 IMISAIAFSNPAVPDLSFTGQNLLSCYQKLYTSSLLQYCLTK-YQQNGPARFCNLVAVLNVATQ- 301

  Fly   469 TWQMIEQIQFAKIFGVAHID 488
            |::.|  :::..::...|.|
 Worm   302 TYENI--LKYLSLYQYFHPD 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	20/78 (26%)
		NR_LBD_HNF4_like	264..494	CDD:132729	44/247 (18%)
nhr-214	NP_510121.3	NR_DBD_like	7..75	CDD:295381	19/67 (28%)
		HOLI	145..298	CDD:214658	29/160 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910