Protein Alignment Hnf4 and nhr-272

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_510122.1
• Gene: nhr-272 / 188209
• WormBaseID: WBGene00011565
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 347
• Identity: 72/347 - (20%)
• Similarity: 137/347 - (39%)
• Gaps: 44/347 - (12%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQY-TCRFARNCVVDKDKRN---QCRYCRLRKC 230
            |.:||.......||...|:.|..|||||:.....: .|:...:|..:...|.   :||:||..||
 Worm     7 CVVCGVSTHLFKYGKYLCNSCDLFFRRSMTPWSFFGDCKHNWDCYKESSNRQRLPKCRHCRFNKC 71

  Fly   231 FKAGMKKEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPNINEDLSN- 294
            ...|:...:          |.|...|.     :..:||:.|..|....|...:.:.:.|..|..
 Worm    72 VDVGLLTVS----------RYTKLADL-----VEYLSLLDANREKTFLKLSISTDFDTNTFLDEN 121

  Fly   295 -----KQFASINDVCESMK-QQLLTLVEWAKQI--PAFNELQLDDQVALLRAHAGEHLLLGLSRR 351
                 |:.:.:|..|:..: ...|:.:|..|.:  |.:...| |.:..|.:.:..:.:|....|.
 Worm   122 PIRFIKKTSDLNFDCDEWQIMNKLSTIEMLKNLDFPKYLSSQ-DLRYFLKKGYFLKGILTMAMRS 185

  Fly   352 SMHLKDVLLLSNNC-VITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFACIKALVF 415
            .::.::.:...|.. :...|..:.|   :::||.:.. |..:||....::.|...|.:.:.|:..
 Worm   186 YLNQEEFMSFPNGVDLFPDHAREGL---HINISFLNL-IRCQLVGKFIELKITREEISMLGAIAV 246

  Fly   416 FDPNAKGL-NEPHRIKSLRHQILNN--LEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQ 477
            .:|....| :...::.|...|:..:  |:..::..|.....||..|:.:|.|.......:|:.:.
 Worm   247 SNPAVPDLSSNGQKLLSCYQQLYTSSLLQYCLAKYQQNGPARFCNIMSVLNVANQTYDNIIKYVC 311

  Fly   478 FAKIFGVAHID----SLLQEML 495
            ..:.:   |.|    .|.|.:|
 Worm   312 LCQYY---HSDMQPSKLYQSVL 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	22/78 (28%)
		NR_LBD_HNF4_like	264..494	CDD:132729	46/246 (19%)
nhr-272	NP_510122.1	ZnF_C4	7..75	CDD:197701	21/67 (31%)
		HOLI	145..302	CDD:214658	31/161 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910