Protein Alignment Hnf4 and nhr-211

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_503218.1
• Gene: nhr-211 / 187963
• WormBaseID: WBGene00020152
• Length: 383
• Species: Caenorhabditis elegans
• Alignment Length: 402
• Identity: 81/402 - (20%)
• Similarity: 151/402 - (37%)
• Gaps: 102/402 - (25%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSV-RKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKA 233
            |.||...|.|:|:||.:|..|..||||:: .|..:.:|:....|........||:.||:|||.:.
 Worm     5 CGICDAPAHGRHFGALTCLSCAAFFRRAIFAKKKRKSCKSGNKCRDFNGNFPQCKSCRMRKCLRV 69

  Fly   234 GMKKEAVQNERDRISCRRTSNDDPDPG---NGLSVI----SLVKAENESRQS------------- 278
            |||.|               :..|.|.   ..|.|.    |::...|:..|:
 Worm    70 GMKLE---------------SKSPPPAAIPQSLEVFVSRPSMILFANKPSQTRNFIDVSNLVARG 119

  Fly   279 ----KAGAAMEPNINEDL------------SNKQFASINDVCESMKQQL-----LTLVEWAKQIP 322
                |.||  :..:|:.|            |.|:|..:|:|......::     :|.......:.
 Worm   120 LSILKHGA--QSPLNQKLTSLEKMALAGSPSMKKFMKVNEVTSKYVAKVWEFDFITAARCLANLD 182

  Fly   323 AFNELQLDDQVALLRA--HAGEHLLLG-----LSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNL 380
            .|:||....::.:|::  |....|...     |.:|.....:.|.:|:|..:      .:.:..:
 Worm   183 GFSELPDKLKMQILQSIWHVWARLFKAARSAQLRKRQGLFSNALQISDNLYV------EMETIRM 241

  Fly   381 DISRIGARIIDE----LVTVMKDVGIDDTEFACIK------ALVFFDPNAKGLNEPHRI------ 429
            |::.:.....|:    |..|.:|..:.|:..:..|      .|::.......|...:|.
 Worm   242 DVTWLTRYSFDQVKYFLYGVEEDSYLKDSIESLTKLELTEIELIYMTAQLSFLYAQNRFSGTEIG 306

  Fly   430 ---KSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQ-------FAKIFGV 484
               :.|:..:.|:|.:|.:..:.::|...|.:..:|    .|.:.:::.|:       .|:.|.:
 Worm   307 EICEKLQDGLGNDLHNYYTKPEKKNRNYVGRLTQML----KINFSLMKNIRTTRERSLIAQTFDI 367

  Fly   485 AHIDSLLQEMLL 496
            ...|....||.:
 Worm   368 FIADYSHPEMFI 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	28/75 (37%)
		NR_LBD_HNF4_like	264..494	CDD:132729	48/300 (16%)
nhr-211	NP_503218.1	ZnF_C4	4..74	CDD:197701	27/68 (40%)
		Hormone_recep	150..358	CDD:278530	35/217 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910