Protein Alignment Hnf4 and nhr-205

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_505588.1
• Gene: nhr-205 / 187567
• WormBaseID: WBGene00011002
• Length: 387
• Species: Caenorhabditis elegans
• Alignment Length: 388
• Identity: 84/388 - (21%)
• Similarity: 155/388 - (39%)
• Gaps: 59/388 - (15%)

  Fly   156 QQLQQQQQQQSPTVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRN 220
            :|...|::.:.|. ||||||...|.|:|..:|..|..||||:|....::.||....|.::...|:
 Worm    10 EQGLSQKETKKPN-CAICGDVGDGHHFGLDACRACAAFFRRTVALGKKFECRQQGACKINTIIRS 73

  Fly   221 QCRYCRLRKCFKAGMKKEAVQNERDR--------------------ISCRRTSNDDPDPGNGLSV 265
            .|:.|||.||...|||:..||..||:                    :||...    |.....:.:
 Worm    74 ICKSCRLNKCLNLGMKRSCVQPRRDKPQKEEKLILPSMNVSPADIEVSCIEV----PIAVEAMPI 134

  Fly   266 ISLVKAENESRQSKAGAAME---PNINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNEL 327
            :..:.|..|..::.......   .||.|..:.:.. ...:..|.:..::..:.:|...  .|||.
 Worm   135 LQKMLANYEKLKNSRNIIHRREGDNIFEKRTPRSL-KFRETLEILSNEMSLVADWIGW--CFNEF 196

  Fly   328 QL--DDQVALLRAHAGEHLLL----GLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIG 386
            :.  .||.::|.::...:.::    .|:.:..:|...:|.|.:.:...:..:......|.|.  |
 Worm   197 EFLPTDQKSILFSNFSVNFIVLERAFLTSKHNNLNQWVLQSGDYIQIDNLEEFFTDEQLKID--G 259

  Fly   387 ARII----------DELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEPHR--IKSLRHQILNN 439
            .::.          |....::|...|:..:|.....|:|:|....|..|..|  .|.::..:.|
 Worm   260 TKLAKLFKPSLEQNDNFHKLLKSEKIEMYDFLVFVVLLFWDHGIVGQTEECREISKKMKSNVTN- 323

  Fly   440 LEDYISDRQYESRG-----RFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQEMLLG 497
              :||...:|..:.     :...::.||..||.|..::.|.:..|.:|....:...|..:::|
 Worm   324 --EYIYYLKYIQKNENPVCQLTMLVSILTCLQRIVCRLREDMSLAHVFDGYTLPPNLYNIIIG 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	31/74 (42%)
		NR_LBD_HNF4_like	264..494	CDD:132729	44/255 (17%)
nhr-205	NP_505588.1	ZnF_C4	22..91	CDD:197701	29/69 (42%)
		HOLI	178..355	CDD:214658	33/183 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910