Protein Alignment Hnf4 and nhr-202

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_503210.1
• Gene: nhr-202 / 187409
• WormBaseID: WBGene00019742
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 400
• Identity: 86/400 - (21%)
• Similarity: 148/400 - (37%)
• Gaps: 83/400 - (20%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
            |.:|.....|.|:||.:|..|..||||....|:...|:....|...|:....|:.|||:|||:.|
 Worm    22 CPVCYKPPHGIHFGAYTCRACAVFFRRFGASNNLKPCKKNNVCDFYKNGYVSCKKCRLKKCFEIG 86

  Fly   235 MKKEAVQNERDRISCRRTS-----------------------------NDDPDPGNGLSVISLV- 269
            ||.|..|.|||  ..:|:|                             .|..:|...:.|..|:
 Worm    87 MKIENFQFERD--PYKRSSICISLAGRIPPTLETFLARPSFIILTAPPKDAQNPKVYIDVKFLID 149

  Fly   270 KAENESRQSKAGAAMEPNINEDLS-------------NKQFASI--NDVCESMKQQLLTLVEWAK 319
            |:..|..:.........||.:.|:             .|:....  :::....:..:|.:.:|..
 Worm   150 KSYGELLKGIETPIQTSNILKKLALGLQQVRGSQRKVTKRLEKFGKDEMFAMWENDMLKVAKWFT 214

  Fly   320 QIPAFNELQLDDQVALLRA-----HAGEHL-LLGLSRRSMHLKDVLL---LSNNCVITRHCPDPL 375
            ....|.:...:.|:.:::.     :..|.| .....|:.|:..|:|:   :.|:.|.   |..
 Worm   215 YFEDFQQFSSEFQIEIIKKVWIVWNGLEKLATTAKMRKRMNCDDILMVLQMENDLVA---CGK-- 274

  Fly   376 VSPNLDISRIG------ARIID-------ELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEP- 426
             |...|:|...      ...||       ||:.:|..:...|.|...:...:.|...:|..:..
 Worm   275 -SVEFDLSWCSNYKAEQFAFIDSNWNKHEELLELMVQLNPTDEELCYMLCHLCFQQISKQCDGQI 338

  Fly   427 -HRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQ----IQFAKIFGVAH 486
             ..::..:..|.|:|.||..:  :.||..:...:..|..|.||..|.|.|    ::..|:|.|..
 Worm   339 LEAVEQFQDSISNHLHDYYLN--HLSRPNYSGRIAALMKLNSIAQQFIYQDQINVEILKVFEVFF 401

  Fly   487 IDSLLQEMLL 496
            ::....|:.:
 Worm   402 VNFSHPELFM 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	29/74 (39%)
		NR_LBD_HNF4_like	264..494	CDD:132729	50/273 (18%)
nhr-202	NP_503210.1	ZnF_C4	21..90	CDD:197701	26/67 (39%)
		Hormone_recep	183..397	CDD:365875	41/221 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910