Protein Alignment Hnf4 and nhr-201

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_001379591.1
• Gene: nhr-201 / 187408
• WormBaseID: WBGene00019741
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 423
• Identity: 93/423 - (21%)
• Similarity: 143/423 - (33%)
• Gaps: 149/423 - (35%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
            |.:|...|.|.|:||.:|..|..||||....|:...|:....|..||:....|:.|||::||..|
 Worm    20 CPVCWKPAHGMHFGAFTCRACAVFFRRFGASNNLKPCKKNNVCNFDKNGYVSCKKCRLQRCFDIG 84

  Fly   235 MKKEAVQNERDRISCR----------------------RTS---------NDDP----------- 257
            ||.:..|.|||....:                      |:|         :|.|
 Worm    85 MKIDNFQFERDPYKQKLEMQAALKVIRNIPQTLDTFLGRSSLIMFTAPSFDDSPTEVHIDVRFLI 149

  Fly   258 ---------------DPGNGLSVISLVKAENESRQSKAGAAMEPNINEDLSNKQFASINDVCESM 307
                           ...|.|..:::......|.|.|....|| ...:|   :.||...|
 Worm   150 DTAYRQLLKGPETPIKTPNALKRLAIGLQNLHSAQEKPTKVME-KFGKD---ETFAIWED----- 205

  Fly   308 KQQLLTLVEWAKQIPAFNELQLDDQVALLRAH----AGEHLL--LGLSRRSMHLKD---VLLLSN 363
              .:|...:|......|.:|....|:.:::..    :|...|  ||.:||.|..:|   ||.:.|
 Worm   206 --DVLKTAKWFSYFDDFQKLPSQLQLDIVKKEWLVWSGLEKLAALGKTRRQMMYEDFAFVLHVDN 268

  Fly   364 NCVITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFAC----IKALVFFDPNAKGLN 424
                                        |||...|.:.:|.:  .|    ::.|.|||.|.|..:
 Worm   269 ----------------------------ELVAFKKTIEVDIS--WCSNYKLEQLDFFDCNFKERH 303

  Fly   425 E-------------------------PHRIKSL-RH--QILNNLEDYISDRQYE------SR--- 452
            |                         .|.:|.. :|  :|:..|:|.||:..:|      ||
 Worm   304 EQLVQQIVALNPTDEELSFMLCYLSFQHYMKHCPKHNVEIVEQLQDSISNHLHEYYLNHMSRPNY 368

  Fly   453 -GRFGEILLILPVLQSITWQMIEQIQFAKIFGV 484
             ||...|:.::..:|........:::..|:|.|
 Worm   369 SGRIAAIMKLINAIQLFLLHDKTKMELMKVFKV 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	29/74 (39%)
		NR_LBD_HNF4_like	264..494	CDD:132729	56/272 (21%)
nhr-201	NP_001379591.1	ZnF_C4	19..88	CDD:197701	27/67 (40%)
		Hormone_recep	184..398	CDD:395054	52/254 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000