Protein Alignment Hnf4 and nhr-198

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_506903.2
• Gene: nhr-198 / 187056
• WormBaseID: WBGene00010603
• Length: 378
• Species: Caenorhabditis elegans
• Alignment Length: 318
• Identity: 74/318 - (23%)
• Similarity: 114/318 - (35%)
• Gaps: 104/318 - (32%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
            |.||...|.|.:|||.:|..||.|||||..|...|.|:....|.:.:.|   ||.||.:||...|
 Worm    22 CVICFGSALGMNYGALTCSACKMFFRRSAEKKLSYNCKKDNQCSIAQRK---CRACRFQKCLNFG 83

  Fly   235 M------------------KKEAVQNE---RDRISCRR----TSNDDPDPGNGLSVISLVKAENE 274
            |                  |.|.:..|   :|..:..:    .||:||      |::.::|..|.
 Worm    84 MTFYSFRGQLAQNFNNLDQKLELLLKELTIKDGKNYTKFINYYSNEDP------SLVDVLKNSNV 142

  Fly   275 SRQSKAGAAMEPNINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAH 339
            .:..|    ..|:...|..:..|..|:           ..:.:.......|:|.|:|:|.|.:.:
 Worm   143 MKMKK----RTPHTVTDSHDWAFLGIH-----------ARISYFMDFEFINKLSLNDKVILFKYN 192

  Fly   340 A------------------------GEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNL 380
            |                        ||.:.|.:.||.......||...:|::
 Worm   193 ALRMGCMTEAMRCFTAKRAYLVTPSGEDVYLPIFRRIFEKTPALLDQTSCMV------------- 244

  Fly   381 DISRIGARIIDELVTVMKDVGIDDTEFACI-KALVFF-DPN-AKGLNEPHRIKSLRHQ 435
                           :.|.:.::.|...|| .||:|| :|. :..|:|..:....|||
 Worm   245 ---------------LYKFIELNITNEECILLALIFFCNPAISDELSEKAKETLSRHQ 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	32/95 (34%)
		NR_LBD_HNF4_like	264..494	CDD:132729	37/199 (19%)
nhr-198	NP_506903.2	ZnF_C4	21..85	CDD:197701	28/65 (43%)
		HOLI	160..319	CDD:214658	31/167 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910