Protein Alignment Hnf4 and nhr-197

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_506901.1
• Gene: nhr-197 / 187055
• WormBaseID: WBGene00010602
• Length: 340
• Species: Caenorhabditis elegans
• Alignment Length: 387
• Identity: 89/387 - (22%)
• Similarity: 151/387 - (39%)
• Gaps: 114/387 - (29%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
            |.:|..|||.::|||.||..||.||.|:|.||..:.|:..:||.:......:||.||.:||...|
 Worm     3 CVVCSGRATNRNYGAMSCFACKMFFHRTVYKNLLFRCKRIQNCTIHFKIFPKCRACRFQKCLIVG 67

  Fly   235 MKKEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPNINEDLSNK---- 295
            |....:             ||           .:|...|:|..|.|      .:.:||..|
 Worm    68 MTLAPL-------------ND-----------GIVSIGNQSDYSYA------KLLDDLKFKNDKN 102

  Fly   296 -----QFASIND--VCESMKQQ-LLTLVEWAKQIP-AFNELQLDDQVALLRAHAGEHLLLGLSRR 351
                 .|.|:.|  :.:.:|.: ::.||   |:.| ..|::   ||.:::.|:         ||.
 Worm   103 YSHFVNFYSLEDPSLADILKDRGIMKLV---KRTPKTLNDV---DQWSIMMAY---------SRI 152

  Fly   352 SMHL------------KDVLLLSN----NCVITRHC-----PDPLVSPN-LD------------- 381
            |..|            |:.|...|    .|:....|     ...|..|| :|
 Worm   153 SYFLDFNFIRDLDSSDKNTLFKYNISRAGCLALAKCAFNENKPKLTFPNDVDAFPSEMYNLCGSS 217

  Fly   382 ---ISRIGARIIDELVTVMKDVGIDDTEFACIKALVFFDPN-AKGLNEPHRIKSLRHQ--ILNNL 440
               ::::..::|.:.|    ::.|.|.|:..:..::|.:|: :...::..::....||  ..:.|
 Worm   218 TAVLNQVSGQVIAKFV----ELKIKDEEYLLLILVMFCNPSISNDFSDKTKLALSSHQQAFCSAL 278

  Fly   441 EDYISDRQYESR-GRFGEILLILPVLQ---------SITWQMIE-QIQFAKIFGVAHIDSLL 491
            ..|......:|. .||.|:|.:..::.         |:..|..| :.||.:|......:|||
 Worm   279 FRYCQINYSKSAPTRFTELLSLFGIVNKSVDNMNNLSMMLQFCEPKFQFKRIMQDLFSNSLL 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	29/74 (39%)
		NR_LBD_HNF4_like	264..494	CDD:132729	58/293 (20%)
nhr-197	NP_506901.1	ZnF_C4	2..69	CDD:197701	28/65 (43%)
		HOLI	152..306	CDD:214658	27/157 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910