Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506902.2 | Gene: | nhr-268 / 187054 | WormBaseID: | WBGene00010601 | Length: | 340 | Species: | Caenorhabditis elegans |
Alignment Length: | 340 | Identity: | 75/340 - (22%) |
---|---|---|---|
Similarity: | 133/340 - (39%) | Gaps: | 82/340 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
Fly 235 MKKEAVQNER------------DRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPN 287
Fly 288 INEDLSNKQFA-----SINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLLLG 347
Fly 348 LSRRSMHLKDVLLLSNNCVITRHCPDPLVSPN-LDI----------------SRIGARIIDELVT 395
Fly 396 VMKDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSL--RHQILNNLEDYIS------DRQYESR 452
Fly 453 G--RFGEILLILPVL 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 32/86 (37%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 40/234 (17%) | ||
nhr-268 | NP_506902.2 | ZnF_C4 | 2..69 | CDD:197701 | 28/66 (42%) |
HOLI | 152..306 | CDD:214658 | 29/178 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |