Protein Alignment Hnf4 and nhr-183

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_503621.1
• Gene: nhr-183 / 185594
• WormBaseID: WBGene00018266
• Length: 394
• Species: Caenorhabditis elegans
• Alignment Length: 400
• Identity: 79/400 - (19%)
• Similarity: 141/400 - (35%)
• Gaps: 98/400 - (24%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRN------QCRYCRLR 228
            |.||...|.|:|:|..||..|..|:||:.....:   :...||:.:..|:.      .||.|||:
 Worm     4 CQICEQPAHGQHFGVVSCRACAAFYRRATLNPKK---KILPNCIHEDGKKMDENGVFSCRRCRLK 65

  Fly   229 KCFKAGMKKEAVQNERDRISCRRTSNDDPDP-------GNGLSVISLVKAENESRQSKAGAAMEP 286
            ||.|.||.....|.|||.||...:..:.|..       .|.|...:.::....::.....:.:..
 Worm    66 KCLKKGMDASKFQLERDLISSSLSMAEIPQTLSTFLGRPNFLLFCNPLEPSTTAKTVVDFSCLLE 130

  Fly   287 NINEDLSNKQFASINDVCESM---------------------------------KQQLLTLVEWA 318
            ..||.|.|.::...|....|:                                 :|::|...:|.
 Worm   131 RANELLKNGRWNPYNSEISSLEKMAMRYENMQIIKSSRLRHLSRMGKDETILIWEQKILNTTDWL 195

  Fly   319 KQIPAFNELQLDDQVALLR------------AHAGEHLLLGLSRRSMHLKDVLLLSNN--CVITR 369
            .....||.|.||.|:.:::            |...|     |.|:.:...|.:.:..:  |:.::
 Worm   196 TNFNEFNVLPLDVQLKIVKTIWQVYGRFEKIAKTAE-----LRRKKLIEHDNVFMVGDEACLNSK 255

  Fly   370 HCPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLN-------EPH 427
            :.       .:|:|.......:::...| |...||.....:|.....:|....||       ..|
 Worm   256 NV-------EMDVSWYTDYSFEQIAYFM-DCFHDDIYLQIVKEFETLNPTPIELNFMLLQVCLHH 312

  Fly   428 RIKSLRHQILNNLEDYISD--------------RQYESRGRFGEILLILPVLQSITWQMIEQIQF 478
            ..|.|...:| .|.||:.:              :......|...::.:..::::...:..|::|.
 Worm   313 AGKKLHGDML-ELTDYLQEVISNQLHNHYLNVRKMPNYSARLARMMKVNNLMRTDLRRQSEKVQL 376

  Fly   479 AKIFGVAHID 488
            |..|.|..::
 Worm   377 AMAFDVFKLE 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	28/80 (35%)
		NR_LBD_HNF4_like	264..494	CDD:132729	44/292 (15%)
nhr-183	NP_503621.1	ZnF_C4	3..75	CDD:197701	26/73 (36%)
		Hormone_recep	165..373	CDD:278530	33/221 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910