Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023845.2 | Gene: | nhr-141 / 184926 | WormBaseID: | WBGene00017787 | Length: | 433 | Species: | Caenorhabditis elegans |
Alignment Length: | 431 | Identity: | 90/431 - (20%) |
---|---|---|---|
Similarity: | 166/431 - (38%) | Gaps: | 106/431 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 139 SPNNNLSGSGSGTNSSQQQLQQQQQQQS-------PTVCAICGDRATGKHYGASSCDGCKGFFRR 196
Fly 197 SVRKNHQYTCRFARNCVVDKDKR---NQCRYCRLRKCFKAGMKKEAVQ-NERDRIS--------- 248
Fly 249 ----CRRTSNDDPDPGNGLSVISLVKAENESRQSK---AGAAMEPNINE---DLSNKQFASI--- 300
Fly 301 -------NDVCESMKQ---------------------------------------QLLTLVEWAK 319
Fly 320 QIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISR 384
Fly 385 IGARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSL---RHQILNNLEDYISD 446
Fly 447 RQYESRGRFGEILLILPVLQSITWQMIEQIQFAKIFGVAHI 487 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 33/78 (42%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 46/282 (16%) | ||
nhr-141 | NP_001023845.2 | NR_DBD_HNF4A | 43..119 | CDD:143518 | 32/76 (42%) |
HOLI | 249..399 | CDD:214658 | 32/168 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24083 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |