Protein Alignment Hnf4 and nhr-165

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_493119.2
• Gene: nhr-165 / 183558
• WormBaseID: WBGene00008158
• Length: 362
• Species: Caenorhabditis elegans
• Alignment Length: 362
• Identity: 80/362 - (22%)
• Similarity: 140/362 - (38%)
• Gaps: 102/362 - (28%)

  Fly   170 CAICGDRATGK-HYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCF-K 232
            |.|||...|.| |:|..||:.|..||||:|..|.:|.|:.:.||:....:|..|:.||...|. |
 Worm    11 CLICGSICTAKFHFGGLSCNACASFFRRTVSLNIRYLCKNSNNCITSPGQRTFCKACRYESCVDK 75

  Fly   233 AGMKKEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPNINEDLSNKQF 297
            ||||::.||.       ||::|..|      ..|....:.:.:|:...|...:.|.:........
 Worm    76 AGMKRDFVQQ-------RRSTNATP------KYILNSTSGSSNREVVRGFITDSNSHLVTQTDHL 127

  Fly   298 ASI--NDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLL 360
            .:|  |:.|:.||:              :::|.....:.|||.:..:     :......||::|.
 Worm   128 RNIDNNEHCKDMKK--------------YSDLLEISHMNLLRFYVKQ-----VEPEKKELKNILQ 173

  Fly   361 LS--NNCVIT------------RHCPDP----------------------------LVSPNLDIS 383
            :.  |:.:||            .|||..                            .::.::|.|
 Worm   174 IKSINDLMITCAYDNGSAMESCVHCPGTGKLSQEDVRLLQKSFQFAHTWLDSTWQYSIATDIDES 238

  Fly   384 RIG----------ARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSLRH--QI 436
            .:.          :.|...|...:.::.:|..|||..|:...:...|:|..|..::.:..|  .:
 Worm   239 EVSGESENLSQFISHIKSTLGACLANLKLDVYEFAAFKSFCVWSIGAQGATESMKVVAQEHYEAV 303

  Fly   437 LNNLEDY------ISDRQYESR------GRFGEILLI 461
            .:.|:.|      :||.:..:|      ||..::.:|
 Worm   304 ASALKMYYKTFTSMSDSEIATRIEEISFGRSSDVQMI 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	33/76 (43%)
		NR_LBD_HNF4_like	264..494	CDD:132729	43/266 (16%)
nhr-165	NP_493119.2	ZnF_C4	10..81	CDD:197701	31/69 (45%)
		HOLI	186..329	CDD:214658	21/142 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910