Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_503435.1 | Gene: | nhr-260 / 183304 | WormBaseID: | WBGene00016517 | Length: | 398 | Species: | Caenorhabditis elegans |
Alignment Length: | 372 | Identity: | 98/372 - (26%) |
---|---|---|---|
Similarity: | 162/372 - (43%) | Gaps: | 60/372 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
Fly 235 MKKEAVQNERDRISCRRTSNDD-PDPGNGLSVISL------VKAENESRQSKAGAAMEPNINE-- 290
Fly 291 -------DLSN----KQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHL 344
Fly 345 LLGLSRRSMHLKD--VLLLSNNCVITRHCPD-----PLVSPNLDISRIGARIIDELVTVM----- 397
Fly 398 ---KDVGIDDTEFACIKALVFFDPNA---------KGLNEPHRIKSLRHQILNNLEDYISDRQYE 450
Fly 451 SRG-RFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQEMLL 496 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 30/74 (41%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 59/273 (22%) | ||
nhr-260 | NP_503435.1 | NR_DBD_HNF4A | 41..115 | CDD:143518 | 30/74 (41%) |
HOLI | 191..368 | CDD:214658 | 40/184 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |