Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_504767.1 | Gene: | nhr-139 / 183179 | WormBaseID: | WBGene00016365 | Length: | 346 | Species: | Caenorhabditis elegans |
Alignment Length: | 345 | Identity: | 70/345 - (20%) |
---|---|---|---|
Similarity: | 125/345 - (36%) | Gaps: | 64/345 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
Fly 235 MKKEAVQNERDR-------------ISCRRTSNDDPDPGNGL-SVISLVKAENESRQSKAGAAME 285
Fly 286 PNINE-----DLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVA------LLRAH 339
Fly 340 AGEHLLLGLSRRSMHLKDVLLLSNNCVITRHC--------PDPLVSPNLDISRIGARIID----E 392
Fly 393 LVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEP--HRIKSLRHQILNNLEDYISDRQYESRGRF 455
Fly 456 GEILLILPVLQSITWQMIEQ 475 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 25/74 (34%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 38/237 (16%) | ||
nhr-139 | NP_504767.1 | ZnF_C4 | 3..66 | CDD:197701 | 22/65 (34%) |
HOLI | 154..315 | CDD:214658 | 31/182 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |