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Protein Alignment Hnf4 and nhr-45
DIOPT Version :9
Sequence 1: | NP_723413.1 |
Gene: | Hnf4 / 44544 |
FlyBaseID: | FBgn0004914 |
Length: | 732 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_508797.3 |
Gene: | nhr-45 / 180738 |
WormBaseID: | WBGene00003635 |
Length: | 525 |
Species: | Caenorhabditis elegans |
Alignment Length: | 183 |
Identity: | 56/183 - (30%) |
Similarity: | 75/183 - (40%) |
Gaps: | 53/183 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
|.:|...|.|:|:|...|..|..||||::..|.:|.|||.|.|.|..:||..||.||..||.:.|
Worm 3 CLVCETDAHGQHFGIRCCRACAAFFRRTLTMNLRYKCRFDRKCEVSFNKRYSCRCCRYEKCVRVG 67
Fly 235 MKKE-------AVQ-----------NERDRI-----------SCRRTS------NDDPDP----- 259
|:|: .|| ||.|.| :||..| |.:|||
Worm 68 MRKDNLTSPVSVVQNKSETEKDSSGNETDSIGHSPHSSLESYTCRPPSFEQQQQNQNPDPPLLMG 132
Fly 260 GNGLSVISLVKAENESRQSKAGAAMEPNINEDLSNKQFASINDVCESMKQQLL 312
.||..| |..|..|.:| |.|:....|:....|.|.:.:.::
Worm 133 NNGTFV-----------QEVASDAYQP--NSDMHQLNFSFHRTVIEEVGRAVM 172
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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