Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506930.1 | Gene: | nhr-60 / 180059 | WormBaseID: | WBGene00003650 | Length: | 443 | Species: | Caenorhabditis elegans |
Alignment Length: | 423 | Identity: | 98/423 - (23%) |
---|---|---|---|
Similarity: | 167/423 - (39%) | Gaps: | 103/423 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 128 SSGSNNNNSMFSPN--NNLSGSGSGTNSSQQQLQQQQQQQSPTVCAICGDRATGKHYGASSCDGC 190
Fly 191 KGFFRRSVRKNHQYTCRFARNCVVDKDKRN---QCRYCRLRKCFKAGMKKEAVQNERDRIS---- 248
Fly 249 ---CRRTSNDDPDPG-------NGLSVISLV-----KAEN--------ESRQSK-AGAAMEPNIN 289
Fly 290 EDLSNKQFASINDVCES---------------------------------------------MKQ 309
Fly 310 ----QLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLLLSNNCVITRH 370
Fly 371 CPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLN-EPHRIKSL-R 433
Fly 434 HQILNNLEDYISDRQYESRGRFGEILLILPVLQ 466 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 31/77 (40%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 52/268 (19%) | ||
nhr-60 | NP_506930.1 | ZnF_C4 | 47..117 | CDD:197701 | 30/70 (43%) |
HOLI | 257..409 | CDD:214658 | 39/162 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24083 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |