Protein Alignment Hnf4 and nhr-51

DIOPT Version :9

• Sequence 1: NP_723413.1
• Gene: Hnf4 / 44544
• FlyBaseID: FBgn0004914
• Length: 732
• Species: Drosophila melanogaster
• Sequence 2: NP_506898.2
• Gene: nhr-51 / 180052
• WormBaseID: WBGene00003641
• Length: 371
• Species: Caenorhabditis elegans
• Alignment Length: 369
• Identity: 77/369 - (20%)
• Similarity: 144/369 - (39%)
• Gaps: 94/369 - (25%)

  Fly   170 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAG 234
            |.||..:|.|:|||..||..||.||.|.|.:|..|.|:....|........:|:.||.:||.:.|
 Worm     5 CLICHRKAAGQHYGVLSCFACKMFFHRMVVENLHYCCQKFNKCYEKFIILPKCKACRYQKCLEMG 69

  Fly   235 MK---------KEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAMEPNINE 290
            |:         :|::..:..|:               |..:|.:..:...|...:.:..:|::.:
 Worm    70 MQAFPRRVKSFEESMDLKIQRM---------------LMNLSEMDEQRHWRMLNSYSIEDPSLGD 119

  Fly   291 DLSNKQFASINDVCESMKQQLLTLVEWA-----KQIPAFNELQLDDQVALLRAHAGEHLLL---- 346
            .|.:   :::..:......|.:|..|||     .:|..|:..:..:.::.    |...|:.
 Worm   120 VLVD---SNVMKIMRKPSNQKVTAHEWAFLDVYSRISHFSNFEFMNNISF----ADRKLIFSFNC 177

  Fly   347 ---GLSRRSMHLKDVLLLSNNCVITRH----CPDPL-----VSPNLDISRIGARIIDELVTVMKD 399
               |:...||.   .|....:|::|..    .||.:     .||.| ::|....::.:|:    :
 Worm   178 LRTGVFHGSMR---TLREQRDCLLTPSGEDVYPDAVHNLFKDSPGL-LNRTCCLLVSKLI----E 234

  Fly   400 VGIDDTEFACIKALVFFDPN--------AKGLNEPHRIK----SLRH-QILNNLEDYISDRQYES 451
            :.:.:.|:..:..:.|.:|.        |:.....|:||    ..|| ||.|         ...:
 Worm   235 LKVTNEEYQLLSLIFFCNPTISHNLSDFARNTLASHQIKYSSALFRHLQITN---------PGTA 290

  Fly   452 RGRFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQEML 495
            ..||.|::.::.|:..:|..|            .|:..:.|.|:
 Worm   291 PVRFQELISLVHVINRVTNDM------------QHVSMMFQCMI 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnf4	NP_723413.1	NR_DBD_HNF4A	170..245	CDD:143518	28/83 (34%)
		NR_LBD_HNF4_like	264..494	CDD:132729	46/263 (17%)
nhr-51	NP_506898.2	ZnF_C4	4..70	CDD:197701	25/64 (39%)
		HOLI	144..307	CDD:214658	34/183 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910