Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367039.1 | Gene: | nhr-49 / 172839 | WormBaseID: | WBGene00003639 | Length: | 501 | Species: | Caenorhabditis elegans |
Alignment Length: | 536 | Identity: | 159/536 - (29%) |
---|---|---|---|
Similarity: | 249/536 - (46%) | Gaps: | 122/536 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 153 SSQQQLQQQQQQQSPTV----------CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCR 207
Fly 208 FARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRTS--------NDDPDPG---- 260
Fly 261 -------NGLSVISLVKAENESRQSKAGAAMEPNINEDLSNK----------------------- 295
Fly 296 -------QFASINDVC-------ESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLLL 346
Fly 347 GLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDI--------SRIGARIIDELVTVMKDVGID 403
Fly 404 DTEFACIKALVFFDPNAKGLNEPHR--IKSLRHQILNNLEDYISDRQ-YESRGRFGEILLILPVL 465
Fly 466 QSITWQMIEQIQFAKIFGVAHIDSLLQEMLLGGELADNPLPLSPPNQSNDYQSPTHTGNMEGGNQ 530
Fly 531 VNSSLDSLATSGGPGSHSLDLEVQHIQALIEANSADDSFRAYAASTAAAAAAAVSSSSSAPASVA 595
Fly 596 P-ASISPPLNSPKSQH 610 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 44/74 (59%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 81/277 (29%) | ||
nhr-49 | NP_001367039.1 | NR_DBD_HNF4A | 35..110 | CDD:143518 | 44/74 (59%) |
HOLI | 228..382 | CDD:214658 | 54/161 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24083 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |