Sequence 1: | NP_723413.1 | Gene: | Hnf4 / 44544 | FlyBaseID: | FBgn0004914 | Length: | 732 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933229.2 | Gene: | hnf4a / 100492541 | XenbaseID: | XB-GENE-482419 | Length: | 466 | Species: | Xenopus tropicalis |
Alignment Length: | 476 | Identity: | 248/476 - (52%) |
---|---|---|---|
Similarity: | 317/476 - (66%) | Gaps: | 64/476 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 NLSGSGSGTNSSQQQLQQQQQQQS---PTVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQY 204
Fly 205 TCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRTSNDDPD-PGNGLSVISL 268
Fly 269 VKAENESRQSKAGAAMEPNINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQV 333
Fly 334 ALLRAHAGEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIGARIIDELVTVMK 398
Fly 399 DVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILP 463
Fly 464 VLQSITWQMIEQIQFAKIFGVAHIDSLLQEMLLGGELADNP---LPLSP--------PN---QSN 514
Fly 515 DYQSPTHTGNMEGGNQVNSSLDSLATSGGPGSHSLDLEVQHIQALIEANSADDSFRAYAASTAAA 579
Fly 580 AAAAVSSSSSAPASVAPASIS 600 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnf4 | NP_723413.1 | NR_DBD_HNF4A | 170..245 | CDD:143518 | 68/74 (92%) |
NR_LBD_HNF4_like | 264..494 | CDD:132729 | 139/229 (61%) | ||
hnf4a | XP_002933229.2 | NR_DBD_HNF4A | 62..137 | CDD:143518 | 68/74 (92%) |
NR_LBD_HNF4_like | 153..374 | CDD:132729 | 139/229 (61%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 256 | 1.000 | Domainoid score | I1997 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 454 | 1.000 | Inparanoid score | I1550 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003424 | |
OrthoInspector | 1 | 1.000 | - | - | otm49535 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1958 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.050 |