DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ct and COY1

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_012742.1 Gene:COY1 / 853675 SGDID:S000001662 Length:679 Species:Saccharomyces cerevisiae


Alignment Length:557 Identity:107/557 - (19%)
Similarity:190/557 - (34%) Gaps:160/557 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AAGTADMDLTA-VQSINDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQ--------------L 57
            :|.|....||| .|.||..:.:|      .:.|::|.....|::..::||              .
Yeast   154 SAKTLAKRLTAKTQEINSTWEEK------GRNWKEREADLLKQLTNVQEQNKALEAKISKNIDIE 212

  Fly    58 STGNPDSNLNSENSDTAAAAATAAAVAAVVAGATATNDIEDEQQQQLQQTASGGILESDSDKLLN 122
            ..||.|.:..:...:.:...|....|         |.::|..|.:..|       ||..:::|  
Yeast   213 GNGNEDGDQENNQKEVSTRIAEYNLV---------TQELETTQARIYQ-------LEKRNEEL-- 259

  Fly   123 SSIVAAAITLQQQNGSNLLANTNTPSPSPPLLSAEQQQQLQSSLQQSGGVGGACLNPKLFFNHAQ 187
                           |..||...:        .||::.:|                      ||:
Yeast   260 ---------------SGALAKATS--------EAEKETEL----------------------HAK 279

  Fly   188 QMMMMEAAAAAAAAALQQQQQQQSPLHSPANEVAIPTEQPAATVATGAAAAAAAAATPIATGNVK 252
            ::.:.:..:..|..:...:|:::|..|: .||:   .||..:.||              .:.:.|
Yeast   280 ELKLNQLESENALLSASYEQERKSTSHA-INEL---KEQLNSVVA--------------ESESYK 326

  Fly   253 SGSTTSNANHTNSNNSHQDEEEL-----------DDEEEDEEEDEDEDDEEENASMQSNADDMEL 306
            |...|......|.::.::.:|||           :|:.:::...||::|....:|:.|....::.
Yeast   327 SELETVRRKLNNYSDYNKIKEELSALKKIEFGVNEDDSDNDIRSEDKNDNTFESSLLSANKKLQA 391

  Fly   307 ---------DAQQETRTEPSATTQQQHQQQDTEDLEENKDAGEASL----NVSNNHNTTDSNNSC 358
                     .||:|.|.|...:..|..||..|  |:|..:..|..|    |||.:.|.|.|..|.
Yeast   392 TLAEYRSKSTAQEEERNELKKSVDQLKQQIAT--LKEANEKLETDLEKVENVSPHFNETASMMSG 454

  Fly   359 SRKNNNGGNESEQHVASS----AEDDDCANNNTNTSNNNNTSNTATSNTNNNNNNNSSSGNSEKR 419
            ..:..|.....:....||    .||.:.:.|.:..............:.|.:.......|||||.
Yeast   455 VTRQMNNRTSHKMSPTSSIIGIPEDGELSGNQSTILPIVTKQRDRFRSRNMDLEKQLRQGNSEKG 519

  Fly   420 KKKNNNNNNGQPAVLLAAKDKEIKALLDELQRLRAQEQTHLVQIQRLEEHLEVKRQHIIRLEARL 484
            |.|           |..:|.|.....|.|..|.......:...:.:..|.::|:.|:     :|:
Yeast   520 KLK-----------LEISKLKGDNTKLYERIRYLQSYNNNNAPVNQSTERIDVESQY-----SRV 568

  Fly   485 DKQQINEALAEATALSAAASTNNNNNSQSSDNNKKLN 521
            ..:.::            ...|...|..:...||||:
Yeast   569 YDESLH------------PMANFRQNELNHYKNKKLS 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527
Homeobox 1749..1801 CDD:278475
COY1NP_012742.1 Smc 107..>455 CDD:224117 77/389 (20%)
CASP_C 408..638 CDD:400477 46/216 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343244
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001636
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14043
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R168
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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