DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ct and AT4G03250

DIOPT Version :9

Sequence 1:	NP_524764.1	Gene:	ct / 44540	FlyBaseID:	FBgn0004198	Length:	2175	Species:	Drosophila melanogaster
Sequence 2:	NP_192234.2	Gene:	AT4G03250 / 827999	AraportID:	AT4G03250	Length:	507	Species:	Arabidopsis thaliana

Alignment Length:	601	Identity:	104/601 - (17%)
Similarity:	195/601 - (32%)	Gaps:	156/601 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 TADMDLTAVQSINDWFFKKE-QIYLLAQFWQ--------------QRATLAEKEVN------TLK 54
            |||.|..:.::......|.. |:..|..|:.              :...|.||:|:      .||
plant     9 TADGDKASTENSKKRKLKTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLK 73

  Fly    55 EQLSTGNPDSNLNSENSDTAAAAATAAAVAAVVAGATATNDI------EDEQQQQLQQTASG-GI 112
            ::.......:.:.|::..:.......:.:.....|:|...|.      |.|.|:.....|.| ..
plant    74 DKRHVKEDGNAIGSQDRSSVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYMGNADGEDS 138

  Fly   113 LESDSDKLLNSSIVAAAITLQQQNGSNLLANTNTPSPSPPLLSAEQQQQLQSSL---QQSG--GV 172
            ..||....|..::|::...::....|..:|:.:          ..|..|...|.   :.||  .|
plant   139 TSSDRSSSLRKNLVSSKDGIRDVESSRYVAHKD----------VIQHPQFMRSYGYNKPSGYLKV 193

  Fly   173 GGACLNPKLFFNHAQQMMMMEAAAAAAAAALQQQQQQQSPLHSPANEVAIPTEQPAATVATGAAA 237
            .|...|               .|..|....|.:|.|:..|   |......|....|....|.
plant   194 KGESEN---------------FAITAVKRQLGRQYQEDGP---PLGVEFDPLPPGAFEPQTN--- 237

  Fly   238 AAAAAATPIATGNVKS-------GSTTSNANHTNSNNSHQ--DEEELDDEEEDEEEDEDEDDEEE 293
              .....||..||.:.       |:..|    .|...|::  .:.:|...:.|.|:||.:||:..
plant   238 --PIVHEPIYVGNQRRPHLPHLLGTRKS----FNPGPSYELARKSKLHSPDPDSEDDEHDDDDNI 296

  Fly   294 NASMQSNADDMELDAQQETRTEP---SATTQQQHQQQDTEDLEENKDAGEASLNVSNNHNTTDSN 355
            ...|:....|      :::..||   |.:|...:.....:..:|........:.|:|:.....|:
plant   297 MVGMEPGLRD------KKSFGEPRLKSPSTSFYNSVPRHKSFKETFKGSPREIPVTNSKKGWISS 355

  Fly   356 NSCSRKNNNGGNESEQHVASSAEDDDCANNNTNTSNNNNTSNTATSNTNNNNNNNSSSGNSEK-- 418
            .|.:..:.|       |:.::.:         |.|.:|..:|.:....||.:|....:|...|
plant   356 KSWAEGSRN-------HLVANVQ---------NLSGSNIETNQSHDYDNNISNGGRKTGYLTKSS 404

  Fly   419 ------RKKKNNNNNNGQPAVLLAAKDKEIKALLDELQRLRAQEQTHLVQIQRLEEHLEVKRQHI 477
                  |.:...:.:.|..:.:......|...:..:.::|.:.::..:.:        .||..:|
plant   405 KLLPPSRSRSPESMDRGPSSGMAGIYHGERNQMKMQREKLHSTDEPPVAK--------RVKHGYI 461

  Fly   478 IRLEARLDKQQINEALAEATALSAAASTNNNNNSQSSDNNKKLNTAAERPMDASSNADLPESTKA 542
                     ||:             .:..:::.|:..:...::|         .|..:||.|...
plant   462 ---------QQV-------------YAPKSSSYSEILERKSQIN---------RSGVELPSSLSG 495

  Fly   543 PVPAEDDEEDEDQAML 558
                 |||.||..:.:
plant   496 -----DDETDESSSSM 506

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527
		Homeobox	1749..1801	CDD:278475
AT4G03250	NP_192234.2	homeodomain	21..77	CDD:238039	10/55 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910