DRSC/TRiP Functional Genomics Resources

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Protein Alignment ct and HAT3

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_191598.1 Gene:HAT3 / 825210 AraportID:AT3G60390 Length:315 Species:Arabidopsis thaliana


Alignment Length:116 Identity:37/116 - (31%)
Similarity:48/116 - (41%) Gaps:21/116 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1693 KNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGS---VGSGVGGAPPSKKQRVLFSE 1754
            |:||...:......|...:||..:.:|        .|.|.||   .|||.|.....||.|:  |:
plant   114 KSERELMAAAGAVGGGRVEDNEIERAS--------CSLGGGSDDEDGSGNGDDSSRKKLRL--SK 168

  Fly  1755 EQKEALRLAF----ALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLK 1801
            ||...|...|    .|:|...:.    ||.:|.|.||.:..||.|.|.|.|
plant   169 EQALVLEETFKEHSTLNPKQKMA----LAKQLNLRTRQVEVWFQNRRARTK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527
Homeobox 1749..1801 CDD:278475 19/55 (35%)
HAT3NP_191598.1 HD-ZIP_N 19..118 CDD:398351 2/3 (67%)
Homeobox 165..215 CDD:395001 19/55 (35%)
HALZ 217..260 CDD:128634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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