Protein Alignment ct and CASP

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_566611.1
• Gene: CASP / 821377
• AraportID: AT3G18480
• Length: 689
• Species: Arabidopsis thaliana
• Alignment Length: 639
• Identity: 117/639 - (18%)
• Similarity: 202/639 - (31%)
• Gaps: 197/639 - (30%)

  Fly    32 IYLLAQFWQQRATLAEKEVNTLKEQ-LSTGNPDSNLNSENSDTAAAAATAAAVAAVVAGATATND 95
            |.::..||::..  .|||.:.|.|| |....     |.|||.......           |.:|.|
plant    26 IPVVTNFWKEFD--LEKEKSLLDEQGLRIAE-----NQENSQKNRRKL-----------AESTRD 72

  Fly    96 IEDEQQQQLQQTASGGILESDSDKLLNSSIVAAAITLQQQNGSNLLANT-----NTPSPSPPLLS 155
            .:....:. :.:....:|:...:::.|       ||.:.:.|.|...|.     ..|.|.|.|.|
plant    73 FKKASPEN-KLSMFNSLLKGYQEEVDN-------ITKRAKFGENAFLNIYQKLYEAPDPFPALAS 129

  Fly   156 AEQQQQLQSSLQQSGGVGGACLNPKLFFNHAQQMMMMEAAAAAAAAALQQQQQQQSPLHSPANEV 220
            ..:|.:..|.::..              |...::.:.|  ....|..|:.||
plant   130 IAEQDRKLSEVESE--------------NRKMKVELEE--FRTEATHLKNQQ------------- 165

  Fly   221 AIPTEQPAATVATGAAAAAAAAATPIATGNVKSGSTTSNANHTNSNNSHQDEEELDDEEEDEEED 285
                    ||:                              ......:.|.|::::::.::..|.
plant   166 --------ATI------------------------------RRLEERNRQLEQQMEEKIKEVVEI 192

  Fly   286 EDEDDEEENASMQSNADDMELDAQQETR-TEPSATTQQQHQQQDTEDLEENKDAGEASLNVSNNH 349
            :..:..|||........|.|...|.:.| .:.|.:|.|:..:.....|.|        |...::.
plant   193 KQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFE--------LRAQSDE 249

  Fly   350 NTTDSNNSCSRKNNNGGNESEQHVASSAEDDDCANNNTNTSNNNNTSNTATSNTNNNNNNNSSSG 414
            .|             .|.:||  |:...::.:.|.....|.........:...|.|.:.:|
plant   250 ET-------------AGKQSE--VSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDN---- 295

  Fly   415 NSEKRKKKNNNNNNGQPAVLLAAKDKEIKALLDELQR----LRAQEQTHLVQIQRLEEHLEVKRQ 475
                 ||.:|.::|......|.||:|.|..|..|:..    |..:.::|:.:|::|...|. |:.
plant   296 -----KKSDNIDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLN-KKD 354

  Fly   476 HII-----RLEARLDKQQINEALAEATALSA------------AASTNNNNNSQSS---DNNKKL 520
            .||     .|:.|...:.:::...:...|.|            ||:|....:...|   |.|:|:
plant   355 TIIEEMKKELQERPSAKLVDDLRKKVKILQAVGYNSIEAEDWDAATTGEEMSKMESLLLDKNRKM 419

  Fly   521 -NTAAERPMDASSNADLPESTKAP---------------VPAEDD-----EEDEDQAMLVDSEE- 563
             :...:..:..|..|.|.|..:|.               ...|||     ...|.:..|.|..|
plant   420 EHEVTQLKVQLSEKASLLEKAEAKGEELTAKVNEQQRLIQKLEDDILKGYGSKERKGALFDEWEF 484

  Fly   564 ------AEDKPEDSHHDDDEDE------------DEDREAVNATTTDSNELKIK 599
                  .:.:|.|..|...|.:            |..|..:..|..:...||.|
plant   485 SEAGVAEQSEPMDQKHVPSEQDQSSMLKVICSQRDRFRARLRETEEEIRRLKEK 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527
		Homeobox	1749..1801	CDD:278475
CASP	NP_566611.1	SMC_prok_B	<130..432	CDD:274008	66/401 (16%)
		CASP_C	438..667	CDD:400477	19/101 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001636
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR14043
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.100