Protein Alignment ct and cux2a

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: XP_021332391.1
• Gene: cux2a / 561650
• ZFINID: ZDB-GENE-031204-9
• Length: 478
• Species: Danio rerio
• Alignment Length: 537
• Identity: 164/537 - (30%)
• Similarity: 244/537 - (45%)
• Gaps: 144/537 - (26%)

  Fly  1334 DMF-----NNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGRE 1393
            |:|     ..|:|..:.::||:||...:|.||.||..|||||||||||:|||||||..||::|:|
Zfish    10 DVFLDSDEQELDTLQVTQQVKQALQSRNIGQRAFGHYVLGLSQGSVSDILARPKPWSKLTRRGKE 74

  Fly  1394 PFIRMKMFLEDENAVHKLVA-----------------------------SQYKIAPEKLMRTGSY 1429
            ||:|||.||.||:::..|..                             |:.::..|:|....|.
Zfish    75 PFLRMKHFLSDEHSMRTLSGIQETLRGLAPCVRPTDVSSDQAIRNILDQSRLEMLDEELRSVHSS 139

  Fly  1430 SGSPQMPQGLASKMQAASLPMQKMMSELKLQEPAQAQHLMQQMQAAAMSAAMQQQQVAQAQQQAQ 1494
            |.|......:...:|.|...||...|.:.|:|         ||:...:..::        |..|.
Zfish   140 SSSDVSENAIRIILQGAQQQMQTNQSPITLEE---------QMRCGTLDPSI--------QTPAD 187

  Fly  1495 QAQQAQQHLQQQAQQHLQQQQHLAQQQHPHQQHHQAAAAAAALHHQSMLLTSPGLPPQHAISLPP 1559
            ..|...|.::.:..:.:|....|:....||                            |..|:
Zfish   188 FVQGIIQKVKYEIDEDVQPPVSLSSVNQPH----------------------------HGWSV-- 222

  Fly  1560 SAGGAQPGGPGGNQGSSNPSNSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITT 1624
                            .|....|:            .||     ||||..:.....:|||..||.
Zfish   223 ----------------ENRDAEER------------FRS-----SPTVCGLDLQNLELDTFSITQ 254

  Fly  1625 KIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERL 1689
            ::|:.|:.:||||::|||.||||:|.|||||||.||||..||:||:|.||||.|||.|.::|::|
Zfish   255 RVKKTLIVHNIGQRVFGEEVLGLTQSSVSELLSHPKPWTKLSLKGKENFIRMHLWLRDPHSVQKL 319

  Fly  1690 QLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSE 1754
                |.::::.:|.|.    ::|:.|...:.:..|              |......|:.||:.|.
Zfish   320 ----NAKKKSDQRARL----KRDSQSVCEALECGD--------------VWRVDALKRPRVVLSV 362

  Fly  1755 EQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQ-------QVPH-GPAGQ 1811
            ::|:.|..|:.|:|||:..||:.||.:|||.|.|::|||:|:|.|:::       ||.. .|||.
Zfish   363 QEKQTLFSAYELEPYPSQNTIDRLAAQLGLQTSTVSNWFYNYRSRIRRDGFCEPAQVRRSSPAGL 427

  Fly  1812 DNPIPSRESTSATPFDP 1828
            .....:..:....|.||
Zfish   428 SLLSLASAAVKQAPRDP 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527	43/80 (54%)
		CUT	1616..1690	CDD:280527	44/73 (60%)
		Homeobox	1749..1801	CDD:278475	25/51 (49%)
cux2a	XP_021332391.1	CUT	16..90	CDD:308148	42/73 (58%)
		CUT	246..319	CDD:308148	44/72 (61%)
		homeodomain	354..410	CDD:238039	26/55 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D101540at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010