DRSC/TRiP Functional Genomics Resources

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Protein Alignment ct and DUXA

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001012747.1 Gene:DUXA / 503835 HGNCID:32179 Length:204 Species:Homo sapiens


Alignment Length:191 Identity:43/191 - (22%)
Similarity:64/191 - (33%) Gaps:51/191 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1658 KPKPWH------MLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSD 1716
            ||.|.:      .|.|...|.  |:|:|..:.......|    :|.||.....|....|.....:
Human    37 KPYPGYATKQKLALEINTEES--RIQIWFQNRRARHGFQ----KRPEAETLESSQSQGQDQPGVE 95

  Fly  1717 TSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANE 1781
            ..|.:                       :::.|..:|..|...|..||..:|||.:.:.|.||.|
Human    96 FQSRE-----------------------ARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKE 137

  Fly  1782 LGLATRTITNWFHNHRMRLKQQ----------------VPHGPAGQDNPIPSRESTSATPF 1826
            :|:....:..||.|.|.||..|                :|.|..|.::.......||.:.|
Human   138 IGVPESRVQIWFQNRRSRLLLQRKREPVASLEQEEQGKIPEGLQGAEDTQNGTNFTSDSHF 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527 9/37 (24%)
Homeobox 1749..1801 CDD:278475 19/51 (37%)
DUXANP_001012747.1 homeodomain 16..74 CDD:238039 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..101 7/54 (13%)
Homeobox 105..155 CDD:278475 18/49 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..204 6/36 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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