Protein Alignment ct and hbn

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Alignment Length: 556
• Identity: 112/556 - (20%)
• Similarity: 162/556 - (29%)
• Gaps: 233/556 - (41%)

  Fly  1526 QHHQAAAAAAALHHQSM--------LLTSPGLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSNSE 1582
            ||||        ||..|        :..||...|:...|:....         |||.....|::.
  Fly     8 QHHQ--------HHPIMPPAMRPAPVQESPVSRPRAVYSIDQIL---------GNQHQIKRSDTP 55

  Fly  1583 KKPMLM-PVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLG 1646
            .:.::. |.||       |.|               ..|.        |.::|
  Fly    56 SEVLITHPHHG-------HPH---------------HIHH--------LHSSN------------ 78

  Fly  1647 LSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQ 1711
             |.||           :.||.:.::...:.|.........::||:         :.:|...|...
  Fly    79 -SNGS-----------NHLSHQQQQQHSQQQHHSQQQQQQQQLQV---------QAKREDSPTNT 122

  Fly  1712 DNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIE 1776
            |...|.   |.:|..:||...|...|.:......::.|..|:..|...|..||....||:|.|.|
  Fly   123 DGGLDV---DNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRE 184

  Fly  1777 FLANELGLATRTITNWFHNHRMRLK-----------------QQVPHGPAGQDNP---IPSREST 1821
            .||..|.|:...:..||.|.|.:.:                 |.:|..|.|...|   :|....:
  Fly   185 DLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGS 249

  Fly  1822 SATPFDPVQFRI-------------LLQQRLLELH----------KERMGMSGAPIPYPPYFAAA 1863
            ..:.|.|..|.:             ||.|.|:..|          .:.||:|
  Fly   250 MQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLS------------- 301

  Fly  1864 AILGRSLAGIPGAAAAAGAAAAAAAVGASGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQD 1928
                 :|.||.||.|||.||||:|.                                     |..
  Fly   302 -----NLNGIFGAGAAAAAAAASAG-------------------------------------YPQ 324

  Fly  1929 DLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKSALAAAAAYMSNAVRSSRRK-------PAA 1986
            :|.|..|                           .||::..:...||   ||.|:       |..
  Fly   325 NLSLHAG---------------------------LSAMSQVSPPCSN---SSPRESPKLVPHPTP 359

  Fly  1987 PQWVNPAGA------VTNPSAVVAAVAAAAAAAADN 2016
            |....|||.      :|......||.:..:||.|.:
  Fly   360 PHATPPAGGNGGGGLLTGGLISTAAQSPNSAAGASS 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527	9/73 (12%)
		Homeobox	1749..1801	CDD:278475	19/51 (37%)
hbn	NP_788420.1	Homeobox	156..209	CDD:278475	19/52 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910