Protein Alignment ct and LHX1

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_005559.2
• Gene: LHX1 / 3975
• HGNCID: 6593
• Length: 406
• Species: Homo sapiens
• Alignment Length: 370
• Identity: 79/370 - (21%)
• Similarity: 125/370 - (33%)
• Gaps: 127/370 - (34%)

  Fly  1638 KIFGEAVLGLSQG-SVSELL--SKPKPWHM----LSIKGREPFIRMQLWLSDANN-VERLQLLKN 1694
            :.||....|.:|| |.|:|:  ::.|.:|:    ..:..::.....:|::.|.|. |.:...|.|
Human    57 RCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSN 121

  Fly  1695 E--RREASKRRRSTG--PNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVG-----GAPPSKKQRV 1750
            .  .:|.|....:||  |:...:|.|.|.:|..|..:::......||...     || ..:..|.
Human   122 SSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGA-KRRGPRT 185

  Fly  1751 LFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHR---MRLKQ---------- 1802
            ....:|.|.|:.|||..|.|.....|.||.|.||..|.|..||.|.|   .|:||
Human   186 TIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHA 250

  Fly  1803 -------------------QVPHGP---------------------------------------- 1808
                               .:|:||
Human   251 FFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVP 315

  Fly  1809 ---------AGQDNPIPSRESTSATPFDPVQFRILLQQRLLELHKERMGMSGAP---IPYPPYFA 1861
                     .|.::|:|....:|..            ||..::.....|.|.:|   :|.|.:..
Human   316 SSGPSGTPLGGLEHPLPGHHPSSEA------------QRFTDILAHPPGDSPSPEPSLPGPLHSM 368

  Fly  1862 AAAILGRSLAGIPGAAAAAGAAAAAAAVGASGGDELQ---ALNQA 1903
            :|.:.|.|   .|.::.:...       |||.|:.|.   .:|:|
Human   369 SAEVFGPS---PPFSSLSVNG-------GASYGNHLSHPPEMNEA 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527	14/59 (24%)
		Homeobox	1749..1801	CDD:278475	22/54 (41%)
LHX1	NP_005559.2	LIM1_Lhx1_Lhx5	4..55	CDD:188753
		LIM2_Lhx1_Lhx5	63..118	CDD:188761	12/54 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	128..187		14/59 (24%)
		Homeobox	183..236	CDD:278475	21/52 (40%)
		An_peroxidase_like	<291..>382	CDD:265428	15/105 (14%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	293..374		12/92 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910