Protein Alignment ct and msx1

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_001032329.1
• Gene: msx1 / 394692
• XenbaseID: XB-GENE-490378
• Length: 275
• Species: Xenopus tropicalis
• Alignment Length: 300
• Identity: 60/300 - (20%)
• Similarity: 89/300 - (29%)
• Gaps: 124/300 - (41%)

  Fly  1619 THDITTKIKEALLANNI--GQKI-FGE---AVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQ 1677
            |:....|::|:...|.:  |.|: .||   .|.|:...||..|::..||       |||
 Frog     9 TYQPGVKVEESPSVNKMQTGLKVALGEDKPKVPGILPFSVEALMADRKP-------GRE------ 60

  Fly  1678 LWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGS--GVG 1740
               .|.::.....|.....   |.|..|..|.:..||                 |.|:|:  .||
 Frog    61 ---RDLSSPTGSPLAGTSH---SPRVGSLAPGETPNS-----------------PISIGNRFPVG 102

  Fly  1741 G----------------------------------APP---------SKKQRVLFSEEQKEALRL 1762
            |                                  :||         ::|.|..|:..|..||..
 Frog   103 GIMKLPEEALVKPESPERSSWIQSPRFSPSPTRRMSPPACTLRKHKTNRKPRTPFTTSQLLALER 167

  Fly  1763 AFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRESTSATPFD 1827
            .|....|.::......::.|.|....:..||.|.|.:.|
 Frog   168 KFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAK-------------------------- 206

  Fly  1828 PVQFRILLQQRLLELHKERMGMSGAPIPYPPYFAAAAILG 1867
                      ||.|...|::.|:..|: .||.|..:..||
 Frog   207 ----------RLQEAELEKLKMAAKPM-LPPAFGISFPLG 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527	19/76 (25%)
		Homeobox	1749..1801	CDD:278475	13/51 (25%)
msx1	NP_001032329.1	PTZ00449	<55..>259	CDD:185628	46/253 (18%)
		Homeobox	153..207	CDD:365835	14/89 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910