DRSC/TRiP Functional Genomics Resources

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Protein Alignment ct and ventx1.2

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_988861.1 Gene:ventx1.2 / 394455 XenbaseID:XB-GENE-920868 Length:262 Species:Xenopus tropicalis


Alignment Length:199 Identity:53/199 - (26%)
Similarity:75/199 - (37%) Gaps:41/199 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1698 EASKRRRSTGP-----NQQDNSSDT-SSNDTNDFYTSSPGPGSVGSGV---GGAPPSKKQRVL-- 1751
            |.::.|:.:.|     ::...|||. |...:.|..|.|.|..|..:..   ..:|.|..||.|  
 Frog    68 EEARNRQFSNPSLPALHRSSGSSDEFSPAGSEDDGTESSGRNSQENDTEHRSKSPKSDLQRRLRT 132

  Fly  1752 -FSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQV----------- 1804
             |:.:|...|..||....|......:.||..|.|:...:..||.|.||:||:|:           
 Frog   133 AFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQDQQPSMVPPP 197

  Fly  1805 -------PHGPAGQDNPIPSREST----SATPFDPVQFRILLQQRLLELHKERMGMSGAPIPYPP 1858
                   .:.|.|.  |:|....:    .|.||...|...:.|    .|| ..|.||.....:||
 Frog   198 VCYPQTFSYYPGGL--PVPLNSGSFYQPPAHPFQAPQHSFIPQ----PLH-HHMRMSAHQEQFPP 255

  Fly  1859 YFAA 1862
            .|.|
 Frog   256 LFGA 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527
Homeobox 1749..1801 CDD:278475 17/54 (31%)
ventx1.2NP_988861.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..129 15/60 (25%)
Homeobox 131..183 CDD:278475 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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