Protein Alignment ct and lms

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 462
• Identity: 94/462 - (20%)
• Similarity: 131/462 - (28%)
• Gaps: 226/462 - (48%)

  Fly  1704 RSTGP--------NQQDNSS--DTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKE 1758
            |::.|        |..|..|  |.:|:|              |:|:|. ...|:.|..||..|.:
  Fly    50 RASSPATSSCLDDNMDDGKSDIDLASDD--------------GNGLGD-DRKKRPRTAFSAAQIK 99

  Fly  1759 ALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQ--------------------- 1802
            ||...|....|.:|.....||.:|.|....|..||.|.|.:.|:
  Fly   100 ALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVETLASHYYAQLGIGG 164

  Fly  1803 ---------------QVPHGPA--------GQDNPIPSRESTSATPFDPVQFRILLQQRLLELHK 1844
                           |.|.||.        |..:..|...:|:||
  Fly   165 LARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTAT-------------------- 209

  Fly  1845 ERMGMSGAPI-PY------PPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGASGGDELQALNQ 1902
                  |:|: ||      ||              :||.:....|..|..|.|       |.||.
  Fly   210 ------GSPMRPYATSGGMPP--------------LPGPSVMESARNAILARG-------QPLNF 247

  Fly  1903 AFKEQMSGLDLSMPTLKRERSDDYQDDLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKSALA 1967
            |..     ..::.|                ..||                              .
  Fly   248 ALP-----FGVAKP----------------PAGG------------------------------V 261

  Fly  1968 AAAAYMSNAVRSSRRKPAAPQWVNPAGAV-TNPSAV---VAAVAAAAAAAADN-----ERII--- 2020
            .||:|:      .|.||.|..:|:.|.:: ||.|.:   .|.:...|.:.|.|     ||:.
  Fly   262 PAASYI------PRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELERVFGDA 320

  Fly  2021 NGVCVMQ--------ASEYGRDDTD----SNKPTDGG---NDSDHEHAQLEIDQRFMEPEVHIKQ 2070
            |...:.|        |:.||.|..:    |.:||...   :|.|.||.
  Fly   321 NANFLQQRSTPVAGTATAYGHDGLNQAQRSRRPTQSESECSDIDCEHL----------------- 368

  Fly  2071 EEDDDEE 2077
              |:|||
  Fly   369 --DEDEE 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527
		Homeobox	1749..1801	CDD:278475	18/51 (35%)
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	18/70 (26%)
		Homeobox	89..142	CDD:278475	18/52 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910