DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ct and ap

DIOPT Version :9

Sequence 1:	NP_524764.1	Gene:	ct / 44540	FlyBaseID:	FBgn0004198	Length:	2175	Species:	Drosophila melanogaster
Sequence 2:	NP_724428.1	Gene:	ap / 35509	FlyBaseID:	FBgn0267978	Length:	469	Species:	Drosophila melanogaster

Alignment Length:	163	Identity:	34/163 - (20%)
Similarity:	63/163 - (38%)	Gaps:	23/163 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly  1696 RREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEAL 1760
            |::...|:|    ..:|..:.|::.|.|..|...    ..||.:..:..:|:.|..|...|...:
  Fly   326 RQKGRPRKR----KPKDIEAFTANIDLNTEYVDF----GRGSHLSSSSRTKRMRTSFKHHQLRTM 382

  Fly  1761 RLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRESTSATP 1825
            :..||::..|:...::.|:.:.||..|.:..||.|.|.:.::.:    ..||......:...|..
  Fly   383 KSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMM----MKQDGSGLLEKGEGALD 443

  Fly  1826 FDPVQFRILLQQRLLELHKERMGMSGAPIPYPP 1858
            .|.:           .:|.....:.|.|...||
  Fly   444 LDSI-----------SVHSPTSFILGGPNSTPP 465

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527
		Homeobox	1749..1801	CDD:278475	14/51 (27%)
ap	NP_724428.1	LIM1_Lhx2_Lhx9	148..201	CDD:188755
		LIM2_Lhx2_Lhx9	206..264	CDD:188763
		Homeobox	371..424	CDD:395001	14/52 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910