DRSC/TRiP Functional Genomics Resources

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Protein Alignment ct and AgaP_AGAP005137

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_558527.3 Gene:AgaP_AGAP005137 / 3289904 VectorBaseID:AGAP005137 Length:432 Species:Anopheles gambiae


Alignment Length:393 Identity:85/393 - (21%)
Similarity:118/393 - (30%) Gaps:145/393 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   665 HHQQQQHHQQQHQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNP---ASNDHHHGHHLHGHGLLH 726
            |.|.|||||   ||.||..||||....:        ..|....|   .....|..:|||.. |.:
Mosquito    81 HQQNQQHHQ---QHGQQQQQQQHQRDCY--------GCGERIAPIEMVMRAKHLVYHLHCF-LCY 133

  Fly   727 PSSAHHLHHQTTESNSNSSTPTAAGNNNGSNNSSSNTNANSTAQLAASLASTLNGTKSLMQEDSN 791
                            ..:.|...|.                       ..::...|.:.|.|..
Mosquito   134 ----------------TCNRPLQKGE-----------------------PFSIRAGKLICQHDLE 159

  Fly   792 ----GLAAVAMAAHAQHAAALGPGFLPGLPAFQFAAAQVAAGGDGRG---HYRFADSELQLPPGA 849
                |.||.|.||.|..||               ||.....||.|.|   |         |||.|
Mosquito   160 KDFYGSAAAAAAAAAAAAA---------------AAMHHHHGGAGAGLGPH---------LPPAA 200

  Fly   850 SMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYIL 914
            .:.|...:.|:..|          ||....:...:...|:..|.:.|:..:..::          
Mosquito   201 HLYGDGDDYLLDDG----------LRTRDGRRGPKRPRTILTSAQRRQFKASFDV---------- 245

  Fly   915 GLSQGTVSELLSKPKPWDKLTEK-GRD---SYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGR 975
                        .|||..|:.|. .:|   |.|.:..|..:..|.|  |.::.|..:        
Mosquito   246 ------------SPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKM--KKILRKSKA-------- 288

  Fly   976 GAGGAGGDDSMSEDRIAHILSEASSLMKQSSVAQHREQERRSH--GGEDSHSNEDSKSPPQSCTS 1038
            .|.||...:....|:      |..|:..:|..:.|      ||  |.:.|:|:......|....|
Mosquito   289 NANGATDGEKNHSDK------EDKSIKLESPSSDH------SHYLGLDSSYSSSSQPLNPNLPYS 341

  Fly  1039 PFF 1041
            |.|
Mosquito   342 PDF 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527 12/72 (17%)
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527
Homeobox 1749..1801 CDD:278475
AgaP_AGAP005137XP_558527.3 LIM 19..71 CDD:295319
LIM 102..157 CDD:295319 11/102 (11%)
Homeobox 227..280 CDD:278475 14/76 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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