DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ct and Zfhx2

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001092273.1 Gene:Zfhx2 / 305888 RGDID:735143 Length:2558 Species:Rattus norvegicus


Alignment Length:1998 Identity:380/1998 - (19%)
Similarity:600/1998 - (30%) Gaps:693/1998 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   535 DLPESTKAPV-----PAEDDEEDED-QAMLVDSEE----AEDKPEDSHHDDDEDEDEDREAVNAT 589
            ::|:::...|     .|||...:.| ||:::..||    :...|..:....|           .:
  Rat   296 EVPDTSTVTVKTNGAQAEDGPPEADVQALVLPGEEVMALSPPSPPTALATWD-----------PS 349

  Fly   590 TTDSNELKIKKEQHSP--------------LDLNVLSPNS-AIAAAAAAAAAAACANDPNKFQAL 639
            .|.:.|..:.:.:..|              |.||..||.| .:|...|.|.:....:||.:...|
  Rat   350 PTQAKESPVSRGEAGPDWFPEGQEEDGGLCLPLNQSSPTSKEVAVLPAPAGSPEDTSDPPQSCRL 414

  Fly   640 LIERTKALAAEALKNGASDALSEDAH----HQQQQ-----------HHQQQHQ---HQQQHHQQQ 686
            ..:.|.|.|       |...||..:|    |.:..           |::.|..   |.::.|.:.
  Rat   415 TDDYTPAPA-------AFQGLSLSSHMSLLHSRNSCKTLKCPKCNWHYKYQQTLDVHMREKHPES 472

  Fly   687 HLHQQH------HHHLQQQPNSGSNSNPASND-HHHGHHLHGHGLLHPSSAHHLHH--------- 735
            :.|..:      |..|.:..:......|...| .::.....|:..:|..|..||.:         
  Rat   473 NSHCSYCSAGGAHPRLARGESYNCGYKPYRCDVCNYSTTTKGNLSIHMQSDKHLANLQGFQAGPG 537

  Fly   736 -QTTESNSNSSTPTAAGNNNGSNNS-------SSNTNANSTAQLAASLASTLNGTKSLMQEDSNG 792
             |.:...: |..|.:.|.......|       |..||.:...::..:....:.....|.|....|
  Rat   538 GQASPPEA-SLPPPSIGEKEPKTKSSWQCKVCSYETNISRNLRIHMTSEKHMQNVLMLHQGLPLG 601

  Fly   793 L--------------AAVA-----------MAAHAQHAAALGPGFLP----------------GL 816
            |              ||..           .|......:..|||..|                |.
  Rat   602 LPPGLVGPGPPPPPGAAPTNPPELFQYFGPQALGQPQTSMPGPGLRPDKPLEAQLLLNGFHHLGA 666

  Fly   817 PAFQFAAAQVAAGGDGRGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKY 881
            ||.:|..|  |.|.        ...|..||| :.:.|...:.|.....|.::...::.|.    .
  Rat   667 PARKFPTA--APGS--------LSPETHLPP-SQLLGSSSDGLSTSPSPDDSPPLKVFRC----L 716

  Fly   882 ANQALDTLHISRRVRELLSVH-NIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYR-K 944
            ..||..|..:     |||..| :||:.|                     |..:..|...|::| |
  Rat   717 VCQAFSTDSL-----ELLLYHCSIGRTL---------------------PEAEWKEVAGDTHRCK 755

  Fly   945 MHAWACDDNAVMLLKSLIPKKDSGLPQY-------AGRGAGGA------------GGDDSMSEDR 990
            :   .|....:.....|..|.|....:|       .|.||.|:            ||..|....|
  Rat   756 L---CCYGTQLKANFQLHLKTDKHTQKYQLAAHLREGGGAMGSPSPLSLGDGTSYGGSVSPLHLR 817

  Fly   991 IAHILSEASSLMKQSSVAQHREQERRSHGGEDSHSNEDSKSPPQ----SCTSPFFKVENQLKQHQ 1051
            ......|::|..|....|:....|..|...:.....|.:::.|:    .|....:...::|...|
  Rat   818 CNICDFESNSKEKMQLHARGSAHEENSQIYKFLLEMEGAEAGPEPGLYHCLLCAWDTPSRLAVLQ 882

  Fly  1052 HLNPEQAAAQQREREREQREREQQQRLRHDDQDKMARLYQELIARTPRETAFPSFLFSPSLFGGA 1116
            ||           |....|:.:.|:||         :|.|...|.....:|..|.|   |...|.
  Rat   883 HL-----------RMPAHRDAQAQRRL---------QLLQSGPAAEEGLSALQSIL---SFSRGR 924

  Fly  1117 AGMPGAASN---AFPAMADENMRHVFER---------------------------------EIAK 1145
            ...||.|.:   |.|..::::.::..|:                                 |..:
  Rat   925 LQTPGKAPDTPLAQPPTSEKDAQNRTEQRASEVTEDRTGPPRDSANQITVFCCPYCSFLSPECDQ 989

  Fly  1146 LQQHQQQQQAAQAQAQFP------------NFSSLMALQQQVLNGAQDLSLAAA------AAKDI 1192
            ::.|...|.|.|.:.:.|            :| .|..|...|....:.|.|.|.      |.|.:
  Rat   990 VRVHTLSQHAVQPKYRCPLCQEQLVGRPALHF-HLSHLHNVVPECVEKLLLVATTVEMTFATKML 1053

  Fly  1193 ---KLNGQRSSLEHSAGSSSCSKDGERDDAYPSSLHGRKSEGGGTPAPPAPPSGPGTGAGAPPTA 1254
               .||.....||..|.....:.:  ||....||....::    :|.||.||.         |..
  Rat  1054 PGPTLNPVEDGLERPAPGPEPTPN--RDQVADSSNLAPEA----SPDPPPPPE---------PPL 1103

  Fly  1255 AP---PTGGASSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQP------PV 1310
            ||   |...:.|....|||.|:.:  |...:|.||.    :||..|:.....::.:|      |.
  Rat  1104 APVEGPMEPSESPQQPPSPASSPV--PRPDAQVEEL----TPLPTMSEEEEGVMGEPRSAEPSPA 1162

  Fly  1311 TPHHST--------------PQRPTKAVLPPITQQQFDMFNNL----NTEDIVRRVKEALSQYSI 1357
            ...|.|              |.||.|..   :.::.|...|.|    |:...:.::|:|....|.
  Rat  1163 DSRHLTYRKTTNFALDKFLDPARPYKCT---VCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSC 1224

  Fly  1358 SQRLFGESVLGLSQGSVSDLLARPKPW-----------------------HMLTQKGREPFIRMK 1399
            ..|  ||:.:.....:.||     ||:                       |....:|.:...|.:
  Rat  1225 PAR--GEAGIPPPTTTASD-----KPFKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGAKTDARTE 1282

  Fly  1400 MFLEDENAVHKLVASQYKIAPEKL---MRTGSYSG-------SPQMPQGLASKMQAASLPMQKMM 1454
                               .||:.   ::.|...|       .|. |.|..|.:...|.|...: 
  Rat  1283 -------------------GPERSQEELKEGETEGEVGTEKKGPD-PSGFMSGLPFLSPPPPPL- 1326

  Fly  1455 SEL-KLQEPAQAQHLMQQMQAAAMSAAMQQQQVAQAQQQAQQAQQAQQHLQQQAQQHLQQQQHLA 1518
             :| :...|.....::....                             |..::...|||||.|.
  Rat  1327 -DLHRFPAPLFTPPVLPPFP-----------------------------LVPESLLKLQQQQLLL 1361

  Fly  1519 QQQHPHQQHHQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSNSEK 1583
                |...|........||...:.:|:.|...|. .:..||.|..|:               .|.
  Rat  1362 ----PFYLHDLKVGPKLALASPTPMLSLPAANPP-PLPAPPKAELAE---------------QEW 1406

  Fly  1584 KPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFG-EAVLGL 1647
            :..|:...||.|..|...|.||              ::......:|||.|      || |.|:..
  Rat  1407 ERPLIAEEGTEAGPSSPPHSSP--------------NEAARTAAKALLEN------FGFELVIQY 1451

  Fly  1648 SQGSVSELLSKPKPWHMLSIKGREP---------FIRMQLWLSDANNVERLQLLKNE--RREASK 1701
            ::|. ..:...|.|....|:.|.:.         |..|.:..:...:|.| :.|..|  .|.|::
  Rat  1452 NEGK-QAVPPPPTPPPPESLGGGDKLACGACGKLFSNMLILKTHEEHVHR-RFLPFEALSRYAAQ 1514

  Fly  1702 RRRS---------TGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGS----GVGGAP-PSKKQ---- 1748
            .|:|         ..|...|.|.::.......|....|..|.:.:    |:.|.| ||:::    
  Rat  1515 FRKSYDSLYPPPVEPPKPPDGSLESPPQLGPPFVVPEPEVGGIHTSEERGLAGGPWPSEEEEGSR 1579

  Fly  1749 -----------RVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQ 1802
                       |..|:|.|.:||:..|....||..|.:|.||:.||||:|.:..||.|.|.:.::
  Rat  1580 GSVVPVGRRFSRTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARK 1644

  Fly  1803 QVPHGPAGQDNPIPSRESTSATPFDPVQFRILLQQRLLELHKERMGMSGAPIPYPPYFAAAAILG 1867
            ....|                                                           |
  Rat  1645 NACEG-----------------------------------------------------------G 1650

  Fly  1868 RSLAGIPGAAAAAGAAAAAAAVGASGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLEL 1932
            ...||  ||...|.......|..|...:.::.|.:.|.:|        |..:.|.::..:::.|:
  Rat  1651 PMTAG--GATGGASGCRRCHATFACVFELVRHLKKCFDDQ--------PPAEEEEAERGEEEEEV 1705

  Fly  1933 E-----------GGGH--------NLSDNESLEGQEPEDKTTDYE----KVLHKSALAAAAAYMS 1974
            |           .|.|        |..|....|...||.|.|:.:    ...|.....:.:....
  Rat  1706 EEEEVEERNPEPAGRHGDRSPERANAEDVGQAEPTRPESKETEGKAPPSPPAHTCDQCSISFPSQ 1770

  Fly  1975 NAVRSSRR-------KPAAPQWV-----------NPAGAVTNPSAVVAAVAAAAAAAADNERIIN 2021
            :.:.:..|       :|:||..:           ||  .|:.||:|.......            
  Rat  1771 DLLTTHHRLHFLPSVQPSAPSQLLDLPLLVFGERNP--VVSGPSSVTGTPLKR------------ 1821

  Fly  2022 GVCVMQASEYGRDDTDSNKPT----DGGNDSDHEH----------AQLEIDQRFMEPEVHIKQEE 2072
                       :.|..|..||    .||.:.:...          .||||..|:.          
  Rat  1822 -----------KHDDGSLSPTGSEAGGGGEGEPPKDKRLRTTILPEQLEILYRWY---------- 1865

  Fly  2073 DDDEEQSGSVNLDNEDNATSEQKLKVINEE---KLRMVRV-----------RRLSSTGGGSSEEM 2123
                         .:|:..:.:.|..|:||   |.|:|:|           .:..||.||.:...
  Rat  1866 -------------MQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERKGQFRSTPGGVAGPA 1917

  Fly  2124 PAPLAPPPPPPAASSSI----VSGESTTSSSSSSNTSSSTPAVTTAAA 2167
            ..|.|.|.|.|....::    :..|:...:......:...|.||.|||
  Rat  1918 AKPTATPSPAPFPKFNLLLSKIEDETGKEAPKREAPAFPYPTVTPAAA 1965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527 14/70 (20%)
CUT 1335..1411 CDD:280527 16/102 (16%)
CUT 1616..1690 CDD:280527 17/83 (20%)
Homeobox 1749..1801 CDD:278475 22/51 (43%)
Zfhx2NP_001092273.1 C2H2 Zn finger 448..468 CDD:275368 3/19 (16%)
zf-H2C2_5 501..525 CDD:404746 4/23 (17%)
C2H2 Zn finger 503..520 CDD:275368 2/16 (13%)
C2H2 Zn finger 1189..1211 CDD:275368 4/24 (17%)
C2H2 Zn finger 1246..1264 CDD:275368 0/17 (0%)
Homeobox 1590..1644 CDD:395001 22/53 (42%)
Homeobox 1850..1903 CDD:395001 14/75 (19%)
Homeobox 2059..2112 CDD:395001
PHA03247 <2183..2296 CDD:223021
C2H2 Zn finger 2439..2482 CDD:275371
C2H2 Zn finger 2483..2505 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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