Protein Alignment ct and LHX6

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: XP_011516823.1
• Gene: LHX6 / 26468
• HGNCID: 21735
• Length: 407
• Species: Homo sapiens
• Alignment Length: 414
• Identity: 78/414 - (18%)
• Similarity: 129/414 - (31%)
• Gaps: 166/414 - (40%)

  Fly  1526 QHHQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAG---------GAQP------------GGP 1569
            :|..||.|..    :...|.:.|.|....:...|.:|         |..|            |..
Human     4 KHENAAPALP----EGCRLPAEGGPATDQVMAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGAL 64

  Fly  1570 GGNQGSSNPSNSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANN 1634
            ..::|.::|.......:..|....:::.|..::                            :.::
Human    65 DKDEGQASPCTPSTPSVCSPPSAASSVPSAGKN----------------------------ICSS 101

  Fly  1635 IGQKIFGEAVLGLSQGSVSELLSKPKPWHM-----------------LSIKGREPFIRM------ 1676
            .|.:|....:|     .|:.|:     ||:                 ..||.:|.|.:|
Human   102 CGLEILDRYLL-----KVNNLI-----WHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRF 156

  Fly  1677 ---------QLWLSDANNVERLQLLKNERREA----------SKRRRSTG--------------- 1707
                     |::.||        .::..|..|          .||:.|||
Human   157 GTKCARCGRQIYASD--------WVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIH 213

  Fly  1708 -PNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGV---GGAP--------PSKKQRVLFSEEQKEAL 1760
             ....:|....:.|               |:|:   |..|        |:|:.|..|:.||.:.:
Human   214 YDTMIENLKRAAEN---------------GNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVM 263

  Fly  1761 RLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSR------E 1819
            :..||.|..|:..|::.||:..||:.|.|..||.|.|.|.|:..|..|.......|||      :
Human   264 QAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSALSD 328

  Fly  1820 STSATPFDPVQFRILLQQRLLELH 1843
            ....|||...:     :.|::.||
Human   329 DIHYTPFSSPE-----RARMVTLH 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527	15/105 (14%)
		Homeobox	1749..1801	CDD:278475	20/51 (39%)
LHX6	XP_011516823.1	LIM1_Lhx6	99..152	CDD:188766	12/62 (19%)
		LIM2_Lhx6	160..214	CDD:188768	10/61 (16%)
		Homeobox	252..304	CDD:278475	20/51 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910