DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ct and ttx-3

DIOPT Version :9

Sequence 1:	NP_524764.1	Gene:	ct / 44540	FlyBaseID:	FBgn0004198	Length:	2175	Species:	Drosophila melanogaster
Sequence 2:	NP_001257168.1	Gene:	ttx-3 / 181357	WormBaseID:	WBGene00006654	Length:	409	Species:	Caenorhabditis elegans

Alignment Length:	135	Identity:	34/135 - (25%)
Similarity:	53/135 - (39%)	Gaps:	22/135 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly  1708 PNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNV 1772
            |.|....:.|.:..:.|    ..|.||      |:..||:.|..|...|..|::..|||:..|:.
Worm   265 PEQPPREASTEAEASTD----EDGNGS------GSQRSKRMRTSFKHHQLRAMKTYFALNHNPDA 319

  Fly  1773 GTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGP------------AGQDNPIPSRESTSATP 1825
            ..::.||.:..|..|.:..||.|.|.:.::::..|.            |..|...|...|:|...
Worm   320 KDLKQLAAKTNLTKRVLQVWFQNARAKYRRELHDGGRSSSPLCVSAPLASMDMNPPLSSSSSGHS 384

  Fly  1826 FDPVQ 1830
            .|..|
Worm   385 TDGYQ 389

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527
		Homeobox	1749..1801	CDD:278475	16/51 (31%)
ttx-3	NP_001257168.1	LIM	110..163	CDD:259829
		LIM	171..226	CDD:295319
		Homeobox	296..348	CDD:278475	16/51 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910