Protein Alignment ct and vab-3

DIOPT Version :9

• Sequence 1: NP_524764.1
• Gene: ct / 44540
• FlyBaseID: FBgn0004198
• Length: 2175
• Species: Drosophila melanogaster
• Sequence 2: NP_001024570.1
• Gene: vab-3 / 181251
• WormBaseID: WBGene00006870
• Length: 455
• Species: Caenorhabditis elegans
• Alignment Length: 406
• Identity: 80/406 - (19%)
• Similarity: 126/406 - (31%)
• Gaps: 164/406 - (40%)

  Fly  1625 KIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERL 1689
            :|::.|||:||..   .|.:..:|  |::.:|.        ::..::..:.||..|.|     |:
 Worm   102 EIRDKLLADNICN---NETIPSVS--SINRVLR--------NLAAKKEQVTMQTELYD-----RI 148

  Fly  1690 QLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGP--GSVG---------------- 1736
            :::                   ||....||     :|...|.|  |:||
 Worm   149 RIV-------------------DNFPYNSS-----WYGQWPIPMNGAVGLNPFVPAPLIEPKTEG 189

  Fly  1737 ---SGVGGAPPS----------------KKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANEL 1782
               ......||:                ::.|..|::.|.|:|...|....||:|...|.||.::
 Worm   190 EFEKDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKI 254

  Fly  1783 GLATRTITNWFHNHRMRLKQQV----------------------------------PHG-PAGQD 1812
            .|....|..||.|.|.:.:::.                                  |.| ||...
 Worm   255 QLPEARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTP 319

  Fly  1813 NPIPSRES-----TSATP-------------FDPVQFRILLQQRLLELHKERMGMSGAPIP---- 1855
            |..||..|     |:..|             .||..|.|            ..|.|.||.|
 Worm   320 NRFPSNNSANLPTTNFVPQTSQMYAGLSQPAMDPYSFGI------------ANGFSMAPYPQVTD 372

  Fly  1856 YPPYFAAAAILGRSLAGIP-------GAAAAAGAAAAAAAVGASGGDELQALNQAFKEQMSGLDL 1913
            :.|:.   ...|||....|       |.......:.|..|||     ::..|:......:|.:..
 Worm   373 FQPHH---MFQGRSPYDFPYPRMPTNGHGFQQSMSPATTAVG-----DIPTLSSGMSLPVSAVLN 429

  Fly  1914 SM-PTLKRERSDDYQD 1928
            |: |:|...:..:..|
 Worm   430 SIDPSLTHSQMHELSD 445

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ct	NP_524764.1	CUT	886..955	CDD:280527
		CUT	1335..1411	CDD:280527
		CUT	1616..1690	CDD:280527	15/64 (23%)
		Homeobox	1749..1801	CDD:278475	18/51 (35%)
vab-3	NP_001024570.1	PAX	5..129	CDD:128645	9/31 (29%)
		COG5576	183..293	CDD:227863	20/109 (18%)
		Homeobox	221..274	CDD:395001	18/52 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910