DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ct and ceh-49

DIOPT Version :10

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_504581.1 Gene:ceh-49 / 179001 WormBaseID:WBGene00017538 Length:313 Species:Caenorhabditis elegans


Alignment Length:394 Identity:86/394 - (21%)
Similarity:139/394 - (35%) Gaps:121/394 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1429 YSGSPQMPQ----GLASKMQAASLPMQKMMSEL--KLQEPAQAQHLMQQMQ---AAAMSAAMQQQ 1484
            ::.||..|.    |.::     |:|::.:: ||  ..|.|..|...:....   .|.:...|...
 Worm     7 FTNSPYTPNYTQYGCSN-----SVPVEHLV-ELTSHFQTPIVAYPFLLDTPFNIYATIPQVMGHC 65

  Fly  1485 QVAQAQQQAQQAQQAQQHLQQQAQQHLQ--QQQHLAQQQHPHQQHHQAAAAAAALHHQSMLLTSP 1547
            ....|.:|.....|....:..:.:.:.|  |.|....:..|:|:.                  :|
 Worm    66 VTMDAPKQMTMYSQLDNDIDAKKENNTQVVQTQPSQTRAAPYQKR------------------AP 112

  Fly  1548 GLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSNSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAA 1612
            ....|.|:|  ||:         .|...|..|..|...||               .:||:.:.. 
 Worm   113 LKQRQEAVS--PSS---------SNSEQSKYSKQEALAML---------------DNPTIIKEI- 150

  Fly  1613 LTQDLDTHDITTKI--------KEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKG 1669
               |.|..|:..|:        :...::..:.|..|.|.:|..:|||:||||:.||||..:|: |
 Worm   151 ---DFDLKDLCDKMFVFFSENKRHIEISKPMNQTNFAEHILNRTQGSLSELLNHPKPWDAVSM-G 211

  Fly  1670 REPFIRMQLWL----SDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSP 1730
            |..:.||..||    .|...:.:|.|.|.:..:.:|..|:                         
 Worm   212 RTVYQRMFNWLEMSEDDRAEIWKLDLKKEKADKTTKTPRA------------------------- 251

  Fly  1731 GPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHN 1795
                              |.|.|::||..|.:.|..:|.|:...::.|.:.|.|...||.|:|.|
 Worm   252 ------------------RCLLSQDQKSQLSIFFETNPRPDSLEMKQLGSTLNLCKSTIINYFTN 298

  Fly  1796 HRMR 1799
            .|.|
 Worm   299 MRRR 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:460543
CUT 1338..1413 CDD:460543
CUT 1616..1691 CDD:460543 28/86 (33%)
Homeodomain 1746..1802 CDD:459649 19/54 (35%)
ceh-49NP_504581.1 CUT 149..233 CDD:460543 27/88 (31%)
HOX 248..302 CDD:197696 19/96 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.