DRSC/TRiP Functional Genomics Resources

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Protein Alignment ct and ceh-44

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_497576.1 Gene:ceh-44 / 175372 WormBaseID:WBGene00000464 Length:1273 Species:Caenorhabditis elegans


Alignment Length:1605 Identity:322/1605 - (20%)
Similarity:546/1605 - (34%) Gaps:554/1605 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 ETRTEPSATTQQQHQQQDTEDLEENKDAGEASLNVSNNHNTTDSNNSC-----SRKNNNGGNESE 370
            :||.|...|.  ..|:||..::.:.:...|:  |........||....     :.::...|..:.
 Worm    17 QTRVEAEVTA--LGQRQDDSEIRKTRLVEES--NAYRGRTNKDSRKVAIPLIKAFQSEFDGLLAR 77

  Fly   371 QHVASSAEDDDCANNNTNTSNNNNTSNTATSNTNNNNNNNSSSGNSEKRKK---KNNNNNNGQPA 432
            ...|.:|..|.| .:..:..:..:....|.:..|:......:....|:.|:   |.||....   
 Worm    78 STAAENALIDIC-KSIVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELED--- 138

  Fly   433 VLLAAKDKEIKALLDELQRLRAQEQTHLVQIQRLEEHLEVKRQHIIRLEARLDKQQINEALAEAT 497
              |..||.:::.|.|:|.:|.:::.   :.|:.....:|.|.:           |::|:.|.|..
 Worm   139 --LRGKDVKVRKLKDKLAKLESEQD---IFIENAVNEVEKKAE-----------QELNDRLTELI 187

  Fly   498 ALSAAASTNNNNNSQSSDNNKKLNTAAERPMDA--SSNADLP---ESTKAPVPAEDDEEDEDQAM 557
            |              ..:..|:.|...|:.||:  |.|.|:.   |..|..|..:|..|:|..::
 Worm   188 A--------------EKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQKDGLENEQLSI 238

  Fly   558 ----LVDSE-----------EAEDKPEDSHHDDDEDEDEDREAVNATTTDSNEL------KIKKE 601
                |.|::           :.|::.|..:........||..|:.:.....:::      .||:.
 Worm   239 AMKDLADAKHKIVFLEERVSQLENEAEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRH 303

  Fly   602 QHSPLDLNVLSPNSAIAAAAAAAAAAACAN-----DPNKFQALLIERTKALAAEALKNGASDALS 661
            :.|.::        .:|....|.:|....|     :.|:.:..|..|..   .||:||.......
 Worm   304 EASHVE--------ELAKWKLAVSAVEKKNKTLIGELNELKNQLESRND---YEAIKNELRLLRE 357

  Fly   662 EDAHHQQQQHHQQQHQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNPASNDHHHGHHLHGHGLLH 726
            .:.....:.:.:...:..:.......|..:.:..||.:    :.|...:||...|..:       
 Worm   358 IEFGDSAEANAESIERLGETVETLDRLLAEKNRRLQNE----NASLRVANDGFKGDEV------- 411

  Fly   727 PSSAHHLHHQTTESNSNSSTPTAAGNNNGSNNSSSNTNANSTAQLAASLAS-------------- 777
                    .:...|.|:|......|...|:..::|....|:.::|...:..              
 Worm   412 --------MKAIVSGSHSRVVETVGKRVGAEEANSYRQKNTDSELIEKIQEAKRNKAVCELKFED 468

  Fly   778 -TLNGTKSLMQEDSNGLA-------AVAMAAHAQHAAALG-----PGFLPGLPAFQFAAA----- 824
             |:|....|..:.:....       .:|.....:|...||     ...||  |..|.|..     
 Worm   469 PTINVLTYLKNQKAKEAGKRDAPTPILAAPVTPKHVTKLGTHTITTTALP--PRTQTAETTQSIL 531

  Fly   825 QVAAGGDGRGHYRFADSELQLP-----------PGASMAGRLGESLIPKGDPMEAKLQEMLRYNM 878
            |..:.|..:   ...:.:|:|.           |...:..:..|....:.:.:| |:|:.::.|:
 Worm   532 QRLSNGSNK---HLLNEDLKLSTVLNLKRFSGNPAKPLEAKTSEEQKAELETIE-KMQKRIQVNV 592

  Fly   879 DKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILG---LSQGTVSELLSKPKPWDKLTEKGRD 940
            .......|:|..|:...:.|:..:|||||||||:::.   .|||::|||||||:.|:|||:|||:
 Worm   593 QALNGHPLNTTEIASHCKRLMIAYNIGQRLFAKHVMNQVVKSQGSLSELLSKPRHWNKLTDKGRE 657

  Fly   941 SYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLMKQS 1005
            ::|:::.|..||.|:.||.||.|::  ..|                ::..|.|  .:|.:|:..|
 Worm   658 AFRRIYGWISDDEAINLLCSLSPRR--VWP----------------ADQNIEH--PKAETLLDTS 702

  Fly  1006 SVAQHREQE--RRSHGGEDSHSNEDSKSPPQS-CTSPFFKVENQLKQHQHLNPEQAAAQQRERER 1067
            ...:.:|:.  |.....:.....|..|||.:| |:|                  ||.|...    
 Worm   703 DPMEFKEEPVIRYDVTPKVEPVIEKIKSPVESPCSS------------------QAGASSL---- 745

  Fly  1068 EQREREQQQRLRHDDQDKMARLYQELIARTPRETAFPSFLFSPSLFGGAAGMPGAASNAFPAMAD 1132
                  :..|.||||..|                                               
 Worm   746 ------RASRWRHDDISK----------------------------------------------- 757

  Fly  1133 ENMRHVFEREIAKLQQHQQQQQAAQAQAQFPNFSSLMALQQQVLNGAQDLSLAAAAAKDIKLNGQ 1197
            |.:..:.:.|:.|:     :::..:::...|                                  
 Worm   758 EKILSILQTELKKI-----EEETTESKVVVP---------------------------------- 783

  Fly  1198 RSSLEHSAGSSSCSKDGERDDAYPSSLHGRKSEGGGTPAPPAPPSGPGTGAGAPPTAAPPTGG-- 1260
                                                                ..|||   |||  
 Worm   784 ----------------------------------------------------VKPTA---TGGNR 793

  Fly  1261 -ASSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAV 1324
             .||||...|                            :|:|..   ..|.|......||.:.. 
 Worm   794 RFSSNSTYES----------------------------SSLTGK---SRPSTVELILKQRISTG- 826

  Fly  1325 LPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQ 1389
            |.|:||.|:|.:..|:|:.:|:::||.|:..|||||.|||.:||||||||||||||||.|..|||
 Worm   827 LQPLTQAQYDAYTVLDTDFLVKQIKEFLTMNSISQRQFGEYILGLSQGSVSDLLARPKTWAQLTQ 891

  Fly  1390 KGREPFIRMKMFLEDENAVHKLVASQYKIA----PEKLMRTGSYSGSPQMPQGLASKMQAASLPM 1450
            |||||||||::|::|..|..:....|.||.    ...|.:|            ||:.:.|.....
 Worm   892 KGREPFIRMQLFMDDVEASEENDEKQPKITICDEDSDLAKT------------LATLLNAVHREP 944

  Fly  1451 QKMMSELKLQEPAQAQHLMQQMQAAAMSAAMQQQQVAQAQQQAQQAQQAQQHLQQQAQQHLQQQQ 1515
            .:..:.:||:..::...:||                                             
 Worm   945 SEPKTSVKLEPLSEIDVIMQ--------------------------------------------- 964

  Fly  1516 HLAQQQHPHQQHHQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSN 1580
                                                      .|||              |.|| 
 Worm   965 ------------------------------------------VPSA--------------SKPS- 972

  Fly  1581 SEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVL 1645
                         :.::|:.:.....:         |||.:|..::|..|..|.|..::||:..|
 Worm   973 -------------SVVKSIDESSGEEI---------LDTFEIVYQVKGILEENGISPRVFGDEYL 1015

  Fly  1646 GLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKR-------- 1702
            ..:....::|:.:.|.:.......:..:.||:.:|||...:. |.:.|.|.:|..|.        
 Worm  1016 HCTSSMCADLMIRTKSFENSKASEKLMYTRMKTFLSDPIAIP-LLVEKEESKETVKAKIESVPAP 1079

  Fly  1703 RRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALD 1767
            |.:..|.::.:||||...|.|   |..|                .||.:.::.||:.||..|..:
 Worm  1080 REAPRPVKRKHSSDTDDYDLN---TKKP----------------IQRTVITDYQKDTLRFVFVNE 1125

  Fly  1768 PYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQD 1812
            .:|:....|.::.:|.::.||:.|||||||.|.|.:...|....|
 Worm  1126 QHPSNELCEQISLKLDMSLRTVQNWFHNHRTRSKAREKEGKVYSD 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527 34/71 (48%)
CUT 1335..1411 CDD:280527 46/75 (61%)
CUT 1616..1690 CDD:280527 18/73 (25%)
Homeobox 1749..1801 CDD:278475 19/51 (37%)
ceh-44NP_497576.1 COG1340 113..388 CDD:224259 56/318 (18%)
Rota_VP2 122..>231 CDD:282884 32/141 (23%)
CUT 596..676 CDD:280527 36/79 (46%)
CUT 838..909 CDD:280527 45/70 (64%)
CUT 984..1059 CDD:280527 18/84 (21%)
Homeobox 1107..1159 CDD:278475 19/51 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158648
Domainoid 1 1.000 96 1.000 Domainoid score I4603
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101540at33208
OrthoFinder 1 1.000 - - FOG0001636
OrthoInspector 1 1.000 - - oto18658
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14043
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R168
SonicParanoid 1 1.000 - - X2130
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.980

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