DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ct and DLX2

DIOPT Version :9

Sequence 1:NP_524764.1 Gene:ct / 44540 FlyBaseID:FBgn0004198 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_004396.1 Gene:DLX2 / 1746 HGNCID:2915 Length:328 Species:Homo sapiens


Alignment Length:438 Identity:92/438 - (21%)
Similarity:128/438 - (29%) Gaps:161/438 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1528 HQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSNSEKKPMLMPV-- 1590
            |....||::.:||.              ..|||.|||   |||||..||:..:..::...:||  
Human    13 HSTQIAASSTYHQH--------------QQPPSGGGA---GPGGNSSSSSSLHKPQESPTLPVST 60

  Fly  1591 -----HGTNAMR---------SLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFG 1641
                 :.||...         |.:.||....|:.:.|                   ||:......
Human    61 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGL-------------------NNVPYSAKS 106

  Fly  1642 EAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRST 1706
            ...||.:....|.     .|:...|              |.|||....:.|:.|.|.        
Human   107 SYDLGYTAAYTSY-----APYGTSS--------------SPANNEPEKEDLEPEIRI-------- 144

  Fly  1707 GPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPS-KKQRVLFSEEQKEALRLAFALDPYP 1770
                                            |.|.|.. :|.|.::|..|..||:..|....|.
Human   145 --------------------------------VNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYL 177

  Fly  1771 NVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRE--STSATPFDPVQFRI 1833
            .:.....||..|||....:..||.|.|.:.|:....|      .|||.:  ..||:|        
Human   178 ALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSG------EIPSEQHPGASASP-------- 228

  Fly  1834 LLQQRLLELHKERMGMSGAPIPYPPYFAAAAILGRSLAGIP-GAAAAAGAAAAAAAVGASGGDEL 1897
                               |...||..|.|:    ...|:| ..|...|..:..:..|:||....
Human   229 -------------------PCASPPVSAPAS----WDFGVPQRMAGGGGPGSGGSGAGSSGSSPS 270

  Fly  1898 QAL-----NQAFKEQMSG----LDLSMPTLKRERSDDYQDDLELEGGG 1936
            .|.     |..:..|.||    |..:.|.|...::..........|||
Human   271 SAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHHHHGGG 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctNP_524764.1 CUT 886..955 CDD:280527
CUT 1335..1411 CDD:280527
CUT 1616..1690 CDD:280527 11/73 (15%)
Homeobox 1749..1801 CDD:278475 16/51 (31%)
DLX2NP_004396.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..81 21/81 (26%)
DLL_N 51..132 CDD:289198 19/118 (16%)
Homeobox 155..208 CDD:278475 16/52 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..270 19/95 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..328 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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