| Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001427359.1 | Gene: | LRBA / 987 | HGNCID: | 1742 | Length: | 2868 | Species: | Homo sapiens |
| Alignment Length: | 3805 | Identity: | 1495/3805 - (39%) |
|---|---|---|---|
| Similarity: | 2072/3805 - (54%) | Gaps: | 1028/3805 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 LKFAVLIGLIEVGQVTNREVVNTVLHLLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEI 91
Fly 92 WSVFIAILRKSVRNLQACTDVGLIEHVLVRLQRSETVVADLLIEMLGVLASYSITVKELKLLFGT 156
Fly 157 MKATNGKWPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSAMVLPPLAKWPYENGFTFTTWFRLD 221
Fly 222 PINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMIAIV 286
Fly 287 YIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATPELDEERVFCGQMSAIYLFSEA 351
Fly 352 LTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSHFQLLPATLGASALSGGSGSGTGSGTG 416
Fly 417 NDASAAAAAAVAAGQQQQLQLQFQILAAEQEARAIDWSDEKLDLNAAFVKIRAVLTARNAVTLAG 481
Fly 482 SSSTGTTAVATAAAAAAAAGAGAGTTAAATSAAAAAAATQNENDAAVGQQQHATHHHATAATGSA 546
Fly 547 DDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAVLYDGKLSNAIVFMYNP 611
Fly 612 VATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHE 676
Fly 677 GLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNL 741
Fly 742 TKYLVTCLSANSDLLLKQLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFLSDTQI 806
Fly 807 YSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIG 871
Fly 872 NGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAAESQL 936
Fly 937 IRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQI 1001
Fly 1002 LYTRHPEPESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMS 1066
Fly 1067 VWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFK 1131
Fly 1132 LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQTAAVKGSVS 1196
Fly 1197 IASLEDVPPVVEEEVEELELEEVEIQEGPI-----TEETEQKSV--IANISDVYNEQLKTDATCN 1254
Fly 1255 GNLEDVKEEEPVQQQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRV 1319
Fly 1320 LQASEAALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQGVLNNEKKTQSQDNKDNKEQPGEQD 1384
Fly 1385 VNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETETSVAPE 1449
Fly 1450 VETPETAKPSPIVPSPVLATNQKTEDAANKLNNNEKLAEISASPEPPIVVETPEADL-LQLSDSE 1513
Fly 1514 TKPNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQTSEEPEDVET 1578
Fly 1579 A--ETLAAAAKEIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILLQLEE-KPASTE 1640
Fly 1641 VQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQVVAIVNQVL 1705
Fly 1706 DTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLLV 1770
Fly 1771 EQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGN---PESKQQQQRSK 1832
Fly 1833 SGSTRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLDFVNSSENAI 1897
Fly 1898 FVVNTVHLISQLADNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRLVNMADVL 1962
Fly 1963 IFATSLNFGELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERTRYNVGALARDVPGAAHLQAL 2027
Fly 2028 IRGAQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSLAIVYFISVL 2092
Fly 2093 MVSKYRDILEPPAEPQIQRQSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQNHNSNMQHQ 2157
Fly 2158 QQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTPLATHSTSS 2222
Fly 2223 SASSTATSQPASSSSLSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGLINGHQQH 2287
Fly 2288 PQLNGKHYAENGSTAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHGSGGTGNNNN 2352
Fly 2353 SSLMNNMRNLRNGGGANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMGGAVGVGMGGVAGGLDG 2417
Fly 2418 -GVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSVLAD--NDSHSSGPPSIKA 2479
Fly 2480 NQTTTIATTTTTTATTHINNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDSDVGSLN 2544
Fly 2545 MNSTENEVPEVESSSEILIDDHKPSHSNDESWTDVNLNEDAAVQAASAGIVVGLVDNRGNVISDK 2609
Fly 2610 HDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSEISVVRVPDGYGGAGSGGGVNSGQGQGV 2674
Fly 2675 PSNQRPRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFAPFLSKTLVG 2739
Fly 2740 SHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGRLLSHAMKDHIV 2804
Fly 2805 RVANEAEFILNRMRADDVLKHADFESQCAQTLLERREEERMCDHLITAARRRDNVIASRLLEKVR 2869
Fly 2870 NIMCNRHGAWGDSSSTSSGGAIVGAVQKS-PYWKLDAWEDDARRRKRMVQNPRGSSHPQATLKAA 2933
Fly 2934 LEN-----------GGPEDAILQTRDEFHTQIAVSRTHPSGQHNGE---LL---DDAELLIEDRE 2981
Fly 2982 LDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWY 3046
Fly 3047 FSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASM 3111
Fly 3112 MSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPS 3176
Fly 3177 NYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQ 3241
Fly 3242 GGKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELP 3306
Fly 3307 PWAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVL 3371
Fly 3372 DPVMREAVENQIRNFGQTPSQLLMEPHPPRSSAMHL-----SPMMFS-AMPEDLCQMLKFYQNSP 3430
Fly 3431 VIHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAV 3495
Fly 3496 HGTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRFLIACGFWDNSFRVFATETAKIVQIVFG 3560
Fly 3561 HFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGDVP-----TPRATLTGHEQ 3620
Fly 3621 AVTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNV 3685
Fly 3686 AAYTINGKKLRHETHNDNLQCMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPACNAGIRSLA 3750
Fly 3751 LTHDQKYLLAGLSTGSIIVFHIDFNRWHHEYQQRY 3785 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rg | NP_001284879.1 | Laminin_G_3 | 210..358 | CDD:463865 | 95/147 (65%) |
| DUF4704 | 629..1123 | CDD:464870 | 278/493 (56%) | ||
| PspC_subgroup_2 | <1433..1807 | CDD:468202 | 60/377 (16%) | ||
| DUF1088 | 2791..2972 | CDD:461925 | 92/198 (46%) | ||
| PH_BEACH | 2996..3093 | CDD:434260 | 58/96 (60%) | ||
| Beach | 3125..3401 | CDD:460459 | 209/275 (76%) | ||
| NBCH_WD40 | 3502..3774 | CDD:466575 | 131/276 (47%) | ||
| WD40 repeat | 3524..3560 | CDD:293791 | 19/35 (54%) | ||
| WD40 repeat | 3566..3617 | CDD:293791 | 28/55 (51%) | ||
| WD40 repeat | 3622..3657 | CDD:293791 | 21/34 (62%) | ||
| WD40 repeat | 3669..3699 | CDD:293791 | 11/29 (38%) | ||
| WD40 repeat | 3704..3739 | CDD:293791 | 16/34 (47%) | ||
| LRBA | NP_001427359.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 969..1005 | 5/52 (10%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1018..1039 | 10/67 (15%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1161..1193 | 10/49 (20%) | |||
| WD 1 | 1301..1343 | 30/53 (57%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1586..1668 | 26/259 (10%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1759..1789 | 11/73 (15%) | |||
| WD 2 | 2596..2638 | 19/41 (46%) | |||
| WD 3 | 2641..2684 | 25/45 (56%) | |||
| WD 4 | 2700..2740 | 23/39 (59%) | |||
| WD 5 | 2782..2821 | 18/38 (47%) | |||
| WD 6 | 2824..2863 | 20/38 (53%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||