Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_171805.1 | Gene: | SPI / 839323 | AraportID: | AT1G03060 | Length: | 3601 | Species: | Arabidopsis thaliana |
Alignment Length: | 3845 | Identity: | 781/3845 - (20%) |
---|---|---|---|
Similarity: | 1264/3845 - (32%) | Gaps: | 1339/3845 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 541 AATGSADDPLGHL-------PTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAV--L 596
Fly 597 YD-----------GKLSNAIVFMYNPVATDGQLC--LQSSP--KGNVSYFVHTPHALMLQDVKAV 646
Fly 647 VTHSIHCTLNSIGGIQVLFPLFSQLDMAHEGLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQ 711
Fly 712 NRGFLVISF--MLQRSSREHLTLEVLGSFLNLTKYLV-----TCLSANSDLLLKQLFCFSF-LTW 768
Fly 769 QLLDHVLFNPAL--------------------W---IYTPANVQARLYSYLATE-------FLSD 803
Fly 804 TQIYSNVRRVSTVLQTVHTLKYYY---WVVNPRAKSGIIPKGLDGPR-----PAQKDILAIRAYI 860
Fly 861 LLFLKQLIMIGNGVKE--DELQSILNYLTTMH----EDENLHDV-LQMLISLMSEHPSSMVPAFD 918
Fly 919 VKHGVRSIFKLLAAESQLIRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSL 983
Fly 984 PTYNVLYEIMTEHI------SQQILYTRHPE----------PESHYRLENPMILK--VVATLIRQ 1030
Fly 1031 SKQTESLIDVKKLFLQDMTLL------CNSNRENRRTV----LQMSVWQEWLIAMAYIHPKSSEE 1085
Fly 1086 QKISDMV--YSL----FRMLLHHAIKHEYGGWRVWVDTLAIV---HSKVSYEEFKLQFAQM--YE 1139
Fly 1140 HYERQRTDNIT----------DPALR-------QARPISTISGWEREELHQQQNGGSAAAVATNQ 1187
Fly 1188 TAAVKGSVSIASLEDVPPVVEEE--VEELELEEVEIQEGPITEETEQKSVIANISDVYNEQLKTD 1250
Fly 1251 ATCNGNLEDVKEEEPVQQQIGDLEKQPEPSTPL-----------GALRETLQLGDDMDVEELELA 1304
Fly 1305 TAKDALNAEQHVSRVLQASEAALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQG------VLN 1363
Fly 1364 NEKKTQSQDNKDNKEQPGEQ--DVNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEV 1426
Fly 1427 NANEIV------------------------SSTEAPKAETETSVAPEVETPETAKPSPIVPSPVL 1467
Fly 1468 ATNQKTEDAANKLNNNEKLAEISASPEP--PIVVETPEADLLQLSDSETKPNKETEAEDSVALAV 1530
Fly 1531 RDIVEQLIDKVIDATEAESASETKTETNNNEI-----PKK---EKQTSEEPEDVETAETLAAAAK 1587
Fly 1588 EIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILLQLEE-KPASTEVQETKIEGDLK 1651
Fly 1652 KPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQVVAIVNQVLDTLVDDTVKAV 1716
Fly 1717 AAEQTT-QTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLLVEQVQQVLQED 1780
Fly 1781 DAQQSA--------GMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTR 1837
Fly 1838 PMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDI------QVWRSHSTKSVLDFVNSSENA 1896
Fly 1897 IFVVNTVHLIS-QLADNLIIAC-----------------GGLLPLLAS-ATSPN----------- 1931
Fly 1932 ------------SELDVLEPTQGMPLEVA-VSFLQRLVNMA----DVLIFATSLNF--------- 1970
Fly 1971 --------------GELEAEKNMSS-------GG----------ILRQCLRLVCTCAVRNCLECK 2004
Fly 2005 ERTRYNVGALARDVPGAAHLQ-ALIRGAQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVI 2068
Fly 2069 YRDVEETKQ----------------AQFLSLAIVYFISVLMVSKYRDILEPPAEPQIQRQSPVLQ 2117
Fly 2118 RTAGGEAASARPLFPQWSHHVYPQFLPE-SHQNHNSNMQHQQQQQQQQQHQQQQHYYQQQQQQQV 2181
Fly 2182 VHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTPLATHSTSSSASSTATSQPASSSSLSSLASQSQ 2246
Fly 2247 QQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGLINGHQQHPQLNGKHYAENGSTAGYHPHSHPH 2311
Fly 2312 PHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHGSGGTGNNNNSS----------LMNNMRNLRNGG 2366
Fly 2367 GANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMGGAVGV-----GMGGVAGGLDGGVVYKTSAI 2426
Fly 2427 NNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSV---------------------------- 2463
Fly 2464 --------LADNDSH-----SSGPPSIKANQTTTIATTTTTTATTH--INNNNTKTTTSNAPTAT 2513
Fly 2514 IKIQQQPLSPPKPLV------PQKLPKSVDSDVGSLNMNSTENEVPEVESSSEILIDDHK----P 2568
Fly 2569 SHSNDESWTDVN-----------LNEDAAVQAASAGIVVGLVDNRGNVISD--KHDPSHHNQQQQ 2620
Fly 2621 QQAGIIGQQQQHGSLGHSERGDKPD----------------SEISVVRVPDGYGGAGSGGGVNSG 2669
Fly 2670 QGQGVPSNQRPRPEELPMKAPALVAQLPLTTPSREASLTQKLEI-----------ALGPVCPLLR 2723
Fly 2724 EIMVDFAPFLSKTLVG----------SHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEW----- 2773
Fly 2774 -------------QNSLQKHAGLAFIEL----INEGRLLSHAMKDHIVRVANEAEFILNRMRADD 2821
Fly 2822 VLKHADFESQCAQTLLERREEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTS 2886
Fly 2887 SGGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPED-AILQTRDEF 2950
Fly 2951 HTQIAV-SRTHPSG----QHNG-------ELLDDAELLIE---------------DRELDLDLTG 2988
Fly 2989 PVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEE--------HPEFQKID-------------- 3031
Fly 3032 -------------------GEVLKYCDHLHGK---------------WYFSEVRAIFSRRYLLQN 3062
Fly 3063 VALEIFLASRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMM------SPRQ----- 3116
Fly 3117 -----LMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPS 3176
Fly 3177 NYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQ 3241
Fly 3242 GGKFDYPDRLFSSVSLSWKNC--QRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIE 3304
Fly 3305 LPPWAK-SPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLD 3368
Fly 3369 GVLDPVMREAVENQIRNFGQTPSQLLMEPH-----------PPRSSAMHLSPMMFSAMPEDLCQM 3422
Fly 3423 LKFYQNSPVIHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYTA------SVQSPSYAESPQSP 3481
Fly 3482 GSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRFLIACGFWDNSFRV 3546
Fly 3547 F--------ATETAKIVQIVFGHFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIV 3603
Fly 3604 GE-GDVPTPRATLTGHEQAVTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPEL 3667
Fly 3668 ITMSREGFIVINYDKGNVAAYTINGKKL----RHETHNDNLQCMLLSRDGEYL-----MTAGDRG 3723
Fly 3724 IVEVWRTFNLA-PLYA---------FPACNAG--------------------IRSLALTHDQKYL 3758
Fly 3759 LAGLSTGSII 3768 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | |
DUF4704 | 634..918 | CDD:292415 | 61/336 (18%) | ||
MARCKS | 1434..1751 | CDD:280269 | 63/328 (19%) | ||
DUF1088 | 2791..2972 | CDD:284000 | 33/193 (17%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 28/152 (18%) | ||
Beach | 3125..3401 | CDD:280327 | 146/289 (51%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 6/43 (14%) | ||
WD40 | <3526..3729 | CDD:295369 | 43/220 (20%) | ||
WD40 | <3530..3773 | CDD:225201 | 59/287 (21%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 18/51 (35%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 6/34 (18%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 5/33 (15%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 10/49 (20%) | ||
SPI | NP_171805.1 | LamG | 1120..>1224 | CDD:304605 | 23/143 (16%) |
PH_BEACH | 2763..2929 | CDD:275391 | 33/186 (18%) | ||
Beach | 2965..3244 | CDD:280327 | 146/278 (53%) | ||
WD40 | <3304..3560 | CDD:295369 | 65/345 (19%) | ||
WD40 | <3307..3579 | CDD:225201 | 68/351 (19%) | ||
WD40 repeat | 3333..3378 | CDD:293791 | 6/45 (13%) | ||
WD40 repeat | 3384..3420 | CDD:293791 | 15/41 (37%) | ||
WD40 repeat | 3425..3461 | CDD:293791 | 11/78 (14%) | ||
WD40 repeat | 3545..3571 | CDD:293791 | 10/23 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13743 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |