Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001329387.1 | Gene: | AT4G02660 / 828210 | AraportID: | AT4G02660 | Length: | 3576 | Species: | Arabidopsis thaliana |
Alignment Length: | 3797 | Identity: | 750/3797 - (19%) |
---|---|---|---|
Similarity: | 1270/3797 - (33%) | Gaps: | 1252/3797 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 618 LCLQSSPKGNVSYFVH-TPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHEGLGDI 681
Fly 682 KRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISF--MLQRSSREHLTLEVLG-------- 736
Fly 737 -SFLNLTK---------------YLVTCLSAN---SDLLLKQLFCFSFLTWQLLDHVLFNPALWI 782
Fly 783 YTPANVQARLYSYLATEFLSDTQIYSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPR 847
Fly 848 PAQKDILAIRAYILLFLKQLIMIGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSS 912
Fly 913 MVPAFDVKH-------GVRSIF-------KLLAAESQ-------LIRLQALKLLGFFLSRSTHKR 956
Fly 957 KYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQILYTRHPEPESHYRLENPMIL 1021
Fly 1022 KVVATLIRQSKQTESLI--------DVKKLFLQDMTLLCNSNRENRRTVLQMSVWQEWLIAMAYI 1078
Fly 1079 HPKSSEEQKI-----SDMVYSLFRML-LHHAIKHEYG---GWRVWVDTLAIVHSKVSYEEFK--- 1131
Fly 1132 --LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQT---AAV 1191
Fly 1192 KGSVSIASLED--------------VPP-VVEEEVEELELEEVEIQEGPITEETEQ----KSVIA 1237
Fly 1238 NISDV------------------------------YNEQLKTDATC------------NGNLEDV 1260
Fly 1261 KEEEPVQQQIGDLEKQPE------------------PSTPLGALRETLQLGDDMDVEELELATAK 1307
Fly 1308 DALNAEQHVSRVLQASEAALNDCKMAVDDVLQESS----------------SVLKDEEIELAVNE 1356
Fly 1357 VVQGVLNNEKKTQSQDNKDNKEQPGEQDVNVSLLNSKNLLNNNNNNNNNSPSPTP---------T 1412
Fly 1413 TATATAETEAETEVNANEIVSSTEAPKAETETSVAPEVETPE---------TAKPSPIVPSPVLA 1468
Fly 1469 TNQKTEDAANKLNNNEKLAEISASPEP-----PIVVETPEADLLQLSDSETK------------- 1515
Fly 1516 --------------------------PNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETK 1554
Fly 1555 TETNNN----------------------EIPKKE------------KQTSEEPEDVETAETLAAA 1585
Fly 1586 AKEI------------------------VQEVVEAALVMVQEESTQEKP--------------EK 1612
Fly 1613 GANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPE----DPK----GHSSVE------ 1663
Fly 1664 -PKTPNLEEPKPQETEQQKS------------------QEVAE-ELPQKPEEQ----VVAIVNQV 1704
Fly 1705 LDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLL 1769
Fly 1770 VEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSG 1834
Fly 1835 STRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQV------W-RSHSTKSVLDFVN- 1891
Fly 1892 ----SSENAIFVVNTVHLISQLADNL-IIACG---GLLPLLAS-ATSPN---------------- 1931
Fly 1932 -------SELDVLEPTQGMPLEVAVSFLQRLVNMADVLIFATSLNFGELEAEKNMS--SGGILRQ 1987
Fly 1988 CLRLVCTCAVRNCLECKERTRYNVGALARDVPGAAHLQ----ALIRGAQASPKNIVESITGQLSP 2048
Fly 2049 VKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFL-SLAIVYF--ISVLMVSKYRDILEPPAEPQIQ 2110
Fly 2111 RQSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQNHNSNMQHQQQQQQQQQHQQQQHYYQQ 2175
Fly 2176 QQQQQVVHNHSHHHMTAAYYQQ----QQHQQVAAGQQQHSPTPLATHSTSSSASSTATSQPASSS 2236
Fly 2237 SLSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGLINGHQQHPQLNGKHYAE---- 2297
Fly 2298 ----NGSTAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLM-------------NGHGSG 2345
Fly 2346 GTGNNNNSSLMNNMRNLRNGGGANSSSSPPGSHQVIQGVAT--AGAVNANAAVGVGMGGAVGVGM 2408
Fly 2409 GGVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSV---------- 2463
Fly 2464 --------------------------LADNDSH-----SSGPPSIKANQTTTIATTTTTTATTH- 2496
Fly 2497 -INNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDSDVGSLNMNSTENEVPEVESSSE 2560
Fly 2561 ILIDDHK----PSHSNDESWTDVNL-----------NEDAAVQAASAGIVVGLVDNRGNVISDKH 2610
Fly 2611 DPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPD-------SEISVVRVPDGYGGAGSGGGVNS 2668
Fly 2669 GQGQGV-------PSNQRP----------RPEELPMKAPALVAQLPLTTPSREASLTQKLEIALG 2716
Fly 2717 PVCPLLREIMVDFAPFL--SKTLVGSHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQK 2779
Fly 2780 ---HAGLAFIELIN--EGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLER 2839
Fly 2840 REEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLD 2904
Fly 2905 AWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHNGEL 2969
Fly 2970 LDDAELLIE---------------DRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFF- 3018
Fly 3019 ---------EVDEE--------------HPEFQK----------------IDGEVLKYCDHLHGK 3044
Fly 3045 ---------------WYFSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPR 3094
Fly 3095 VGVGIKYGIPQTRRASMM------SPRQ----------LMRNSNMTQKWQRREISNFEYLMFLNT 3143
Fly 3144 IAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTI 3208
Fly 3209 PPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLSWKNC--QRDTSDVKE 3271
Fly 3272 LIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAK-SPEEFVRINRMALESEFVSCQLHQW 3335
Fly 3336 IDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTPSQLLMEPH-- 3398
Fly 3399 -------PPR--SSAMHLSPMMFSAMPEDLCQMLKFYQNSPVIHISANTYPQLSLPSVVTVTAGH 3454
Fly 3455 QFAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLK 3519
Fly 3520 IRSNCFVTTVDSRFLIACGFWDNSFRVF--------ATETAKIVQIVFGHFGVVTCMARSECNIT 3576
Fly 3577 SDCYIASGSADCTVLLWHWNARTQSIVGEGDVPTPRATLTGHEQAVTSVVISAELGLVVSGSSNG 3641
Fly 3642 PVL-IHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVAAYTINGKKLRHETHNDNLQ 3705
Fly 3706 CMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPA---------CNAG---------------- 3745
Fly 3746 ----IRSLALTHDQKYLLAGLSTGSII 3768 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | |
DUF4704 | 634..918 | CDD:292415 | 61/312 (20%) | ||
MARCKS | 1434..1751 | CDD:280269 | 67/479 (14%) | ||
DUF1088 | 2791..2972 | CDD:284000 | 30/180 (17%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 25/151 (17%) | ||
Beach | 3125..3401 | CDD:280327 | 148/287 (52%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 6/43 (14%) | ||
WD40 | <3526..3729 | CDD:295369 | 42/211 (20%) | ||
WD40 | <3530..3773 | CDD:225201 | 58/277 (21%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 14/50 (28%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 12/35 (34%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 2/29 (7%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 6/34 (18%) | ||
AT4G02660 | NP_001329387.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13743 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |