| Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001329387.1 | Gene: | AT4G02660 / 828210 | AraportID: | AT4G02660 | Length: | 3576 | Species: | Arabidopsis thaliana |
| Alignment Length: | 3796 | Identity: | 748/3796 - (19%) |
|---|---|---|---|
| Similarity: | 1267/3796 - (33%) | Gaps: | 1250/3796 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 618 LCLQSSPKGNVSYFVH-TPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHEGLGDI 681
Fly 682 KRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISF--MLQRSSREHLTLEVLG-------- 736
Fly 737 -SFLNLTK---------------YLVTCLSAN---SDLLLKQLFCFSFLTWQLLDHVLFNPALWI 782
Fly 783 YTPANVQARLYSYLATEFLSDTQIYSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPR 847
Fly 848 PAQKDILAIRAYILLFLKQLIMIGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSS 912
Fly 913 MVPAFDVKH-------GVRSIF-------KLLAAESQ-------LIRLQALKLLGFFLSRSTHKR 956
Fly 957 KYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQILYTRHPEPESHYRLENPMIL 1021
Fly 1022 KVVATLIRQSKQTESLI--------DVKKLFLQDMTLLCNSNRENRRTVLQMSVWQEWLIAMAYI 1078
Fly 1079 HPKSSEEQKI-----SDMVYSLFRML-LHHAIKHEYG---GWRVWVDTLAIVHSKVSYEEFK--- 1131
Fly 1132 --LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQT---AAV 1191
Fly 1192 KGSVSIASLED--------------VPP-VVEEEVEELELEEVEIQEGPITEETEQ----KSVIA 1237
Fly 1238 NISDV------------------------------YNEQLKTDATC------------NGNLEDV 1260
Fly 1261 KEEEPVQQQIGDLEKQPE------------------PSTPLGALRETLQLGDDMDVEELELATAK 1307
Fly 1308 DALNAEQHVSRVLQASEAALNDCKMAVDDVLQESS----------------SVLKDEEIELAVNE 1356
Fly 1357 VVQGVLNNEKKTQSQDNKDNKEQPGEQDVNVSLLNSKNLLNNNNNNNNNSPSPTP---------T 1412
Fly 1413 TATATAETEAETEVNANEIVSSTEAPKAETETSVAPEVETPE---------TAKPSPIVPSPVLA 1468
Fly 1469 TNQKTEDAANKLNNNEKLAEISASPEP-----PIVVETPEADLLQLSDSETK------------- 1515
Fly 1516 --------------------------PNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETK 1554
Fly 1555 TETNNN----------------------EIPKKE------------KQTSEEPEDVETAETLAAA 1585
Fly 1586 AKEI------------------------VQEVVEAALVMVQEESTQEKP--------------EK 1612
Fly 1613 GANSEEEKNEIGKEEILLQLEEKPASTEVQETKI-------EGDLKKPEDPKGHSSVEPKTP--- 1667
Fly 1668 ----NLEEPKPQETEQQKS------------------QEVAE-ELPQKPEEQ----VVAIVNQVL 1705
Fly 1706 DTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLLV 1770
Fly 1771 EQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGS 1835
Fly 1836 TRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQV------W-RSHSTKSVLDFVN-- 1891
Fly 1892 ---SSENAIFVVNTVHLISQLADNL-IIACG---GLLPLLAS-ATSPN----------------- 1931
Fly 1932 ------SELDVLEPTQGMPLEVAVSFLQRLVNMADVLIFATSLNFGELEAEKNMS--SGGILRQC 1988
Fly 1989 LRLVCTCAVRNCLECKERTRYNVGALARDVPGAAHLQ----ALIRGAQASPKNIVESITGQLSPV 2049
Fly 2050 KDPEKLLQDMDVNRLRAVIYRDVEETKQAQFL-SLAIVYF--ISVLMVSKYRDILEPPAEPQIQR 2111
Fly 2112 QSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQNHNSNMQHQQQQQQQQQHQQQQHYYQQQ 2176
Fly 2177 QQQQVVHNHSHHHMTAAYYQQ----QQHQQVAAGQQQHSPTPLATHSTSSSASSTATSQPASSSS 2237
Fly 2238 LSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGLINGHQQHPQLNGKHYAE----- 2297
Fly 2298 ---NGSTAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLM-------------NGHGSGG 2346
Fly 2347 TGNNNNSSLMNNMRNLRNGGGANSSSSPPGSHQVIQGVAT--AGAVNANAAVGVGMGGAVGVGMG 2409
Fly 2410 GVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSV----------- 2463
Fly 2464 -------------------------LADNDSH-----SSGPPSIKANQTTTIATTTTTTATTH-- 2496
Fly 2497 INNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDSDVGSLNMNSTENEVPEVESSSEI 2561
Fly 2562 LIDDHK----PSHSNDESWTDVNL-----------NEDAAVQAASAGIVVGLVDNRGNVISDKHD 2611
Fly 2612 PSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPD-------SEISVVRVPDGYGGAGSGGGVNSG 2669
Fly 2670 QGQGV-------PSNQRP----------RPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGP 2717
Fly 2718 VCPLLREIMVDFAPFL--SKTLVGSHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQK- 2779
Fly 2780 --HAGLAFIELIN--EGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLERR 2840
Fly 2841 EEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLDA 2905
Fly 2906 WEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHNGELL 2970
Fly 2971 DDAELLIE---------------DRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFF-- 3018
Fly 3019 --------EVDEE--------------HPEFQK----------------IDGEVLKYCDHLHGK- 3044
Fly 3045 --------------WYFSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPRV 3095
Fly 3096 GVGIKYGIPQTRRASMM------SPRQ----------LMRNSNMTQKWQRREISNFEYLMFLNTI 3144
Fly 3145 AGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIP 3209
Fly 3210 PFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLSWKNC--QRDTSDVKEL 3272
Fly 3273 IPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAK-SPEEFVRINRMALESEFVSCQLHQWI 3336
Fly 3337 DLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTPSQLLMEPH--- 3398
Fly 3399 ------PPR--SSAMHLSPMMFSAMPEDLCQMLKFYQNSPVIHISANTYPQLSLPSVVTVTAGHQ 3455
Fly 3456 FAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKI 3520
Fly 3521 RSNCFVTTVDSRFLIACGFWDNSFRVF--------ATETAKIVQIVFGHFGVVTCMARSECNITS 3577
Fly 3578 DCYIASGSADCTVLLWHWNARTQSIVGEGDVPTPRATLTGHEQAVTSVVISAELGLVVSGSSNGP 3642
Fly 3643 VL-IHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVAAYTINGKKLRHETHNDNLQC 3706
Fly 3707 MLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPA---------CNAG----------------- 3745
Fly 3746 ---IRSLALTHDQKYLLAGLSTGSII 3768 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rg | NP_001284879.1 | Laminin_G_3 | 210..358 | CDD:463865 | |
| DUF4704 | 629..1123 | CDD:464870 | 101/561 (18%) | ||
| PspC_subgroup_2 | <1433..1807 | CDD:468202 | 75/535 (14%) | ||
| DUF1088 | 2791..2972 | CDD:461925 | 30/180 (17%) | ||
| PH_BEACH | 2996..3093 | CDD:434260 | 25/151 (17%) | ||
| Beach | 3125..3401 | CDD:460459 | 148/287 (52%) | ||
| NBCH_WD40 | 3502..3774 | CDD:466575 | 60/305 (20%) | ||
| WD40 repeat | 3524..3560 | CDD:293791 | 6/43 (14%) | ||
| WD40 repeat | 3566..3617 | CDD:293791 | 14/50 (28%) | ||
| WD40 repeat | 3622..3657 | CDD:293791 | 12/35 (34%) | ||
| WD40 repeat | 3669..3699 | CDD:293791 | 2/29 (7%) | ||
| WD40 repeat | 3704..3739 | CDD:293791 | 6/34 (18%) | ||
| AT4G02660 | NP_001329387.1 | Laminin_G_3 | <1145..1239 | CDD:463865 | 21/123 (17%) |
| PH_BEACH | 2756..2922 | CDD:275391 | 29/185 (16%) | ||
| Beach | 2957..3237 | CDD:214982 | 148/279 (53%) | ||
| WD40 | <3297..3552 | CDD:475233 | 62/336 (18%) | ||
| WD40 repeat | 3326..3371 | CDD:293791 | 6/45 (13%) | ||
| WD40 repeat | 3377..3413 | CDD:293791 | 14/50 (28%) | ||
| WD40 repeat | 3418..3452 | CDD:293791 | 12/35 (34%) | ||
| WD40 repeat | 3537..3574 | CDD:293791 | 11/23 (48%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||