Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006502410.1 | Gene: | Lrba / 80877 | MGIID: | 1933162 | Length: | 2871 | Species: | Mus musculus |
Alignment Length: | 3809 | Identity: | 1521/3809 - (39%) |
---|---|---|---|
Similarity: | 2076/3809 - (54%) | Gaps: | 1033/3809 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LKFAVLIGLIEVGQVTNREVVNTVLHLLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEI 91
Fly 92 WSVFIAILRKSVRNLQACTDVGLIEHVLVRLQRSETVVADLLIEMLGVLASYSITVKELKLLFGT 156
Fly 157 MKATNGKWPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSAMVLPPLAKWPYENGFTFTTWFRLD 221
Fly 222 PINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMIAIV 286
Fly 287 YIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATPELDEERVFCGQMSAIYLFSEA 351
Fly 352 LTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSHFQLLPATLGASALSGGSGSGTGSGTG 416
Fly 417 NDASAAAAAAVAAGQQQQLQLQFQILAAEQEARAIDWSDEKLDLNAAFVKIRAVLTARNAVTLAG 481
Fly 482 SSSTGTTAVATAAAAAAAAGAGAGTTAAATSAAAAAAATQNENDAAVGQQQHATHHHATAATGSA 546
Fly 547 DDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAVLYDGKLSNAIVFMYNP 611
Fly 612 VATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHE 676
Fly 677 GLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNL 741
Fly 742 TKYLVTCLSANSDLLLKQLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFLSDTQI 806
Fly 807 YSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIG 871
Fly 872 NGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAAESQL 936
Fly 937 IRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQI 1001
Fly 1002 LYTRHPEPESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMS 1066
Fly 1067 VWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFK 1131
Fly 1132 LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQTAAVKG-SV 1195
Fly 1196 SIASLEDVPPVVEEEVEELELEEVEIQEGPI----TEETEQKSVIANISDVYNEQLKTDATCNGN 1256
Fly 1257 LE--DVKEEEPVQQQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRV 1319
Fly 1320 LQASEAALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQGVLNNEKKTQSQDNKDNKEQPGEQD 1384
Fly 1385 VNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETETSVAPE 1449
Fly 1450 VETPETAKPSPIVPSPVLATNQKTEDAANKLNNNEKLAEISASPEPPIVVETPEADLLQLSDSET 1514
Fly 1515 KPNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQTSEE---PEDV 1576
Fly 1577 ETAETLAAAAKEIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEV 1641
Fly 1642 QETKIEGDLKKPEDPKGHSSVEPKTPNL----------EEPKPQETEQQKSQEVAEELPQKPEEQ 1696
Fly 1697 VVAIVNQVLDTLVDDTVKAV-AAEQTTQTSPAPEEQSPQILAMESPATS-VRVKPTEVDSTTQTT 1759
Fly 1760 PKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPES 1824
Fly 1825 KQQQQRSKSGSTRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLDF 1889
Fly 1890 VNSSENAIFVVNTVHLISQLADNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQR 1954
Fly 1955 LVNMADVLIFATSLNFGELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERTRYNV-GALARDV 2018
Fly 2019 PGAAHLQALIRGAQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSL 2083
Fly 2084 AIVYFISVLMVSKYRDILEPPAEPQIQRQSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQ 2148
Fly 2149 NHNSNMQHQQQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPT 2213
Fly 2214 PLATHSTSSSASSTATSQPASSSSLSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHY 2278
Fly 2279 GLINGHQQHPQLNGKHYAENGSTAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHG 2343
Fly 2344 SGGTGNNNNSSLMNNMRNLRNGGGANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMGGAVGVGM 2408
Fly 2409 GGVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSVLADNDSHSSG 2473
Fly 2474 PPSIKANQTTTIATTTTTTATTHINNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDS 2538
Fly 2539 DVGSLNMNSTENEVPEVESSSEILIDDHKPSHSNDESWTDVNLNEDAAVQAASAGIVVGLVDNRG 2603
Fly 2604 NVISDKHDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSEISVVRVPDGYGGAGSGGGVNS 2668
Fly 2669 GQGQGVPSNQRPRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFAPFL 2733
Fly 2734 SKTLVGSHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGRLLSHA 2798
Fly 2799 MKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLERREEERMCDHLITAARRRDNVIASR 2863
Fly 2864 LLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGSSHPQA 2928
Fly 2929 TLKAALENG------------GPEDAILQTRDEFHTQIAVSRTHPSGQHNGE---LL---DDAEL 2975
Fly 2976 LIEDRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDH 3040
Fly 3041 LHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQ 3105
Fly 3106 TRRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDL 3170
Fly 3171 DLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTT 3235
Fly 3236 MFLALQGGKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALV 3300
Fly 3301 DDIELPPWAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSV 3365
Fly 3366 DLDGVLDPVMREAVENQIRNFGQTPSQLLMEPHPPRSSAMHL-----SPMMFS-AMPEDLCQMLK 3424
Fly 3425 FYQNSPVIHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTI 3489
Fly 3490 DPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRFLIACGFWDNSFRVFATETAKI 3554
Fly 3555 VQIVFGHFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIVGE---GDVPTPRATLT 3616
Fly 3617 GHEQAVTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYD 3681
Fly 3682 KGNVAAYTINGKKLRHETHNDNLQCMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPACNAGI 3746
Fly 3747 RSLALTHDQKYLLAGLSTGSIIVFHIDFNRWHHEYQQRY 3785 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | 94/147 (64%) |
DUF4704 | 634..918 | CDD:292415 | 163/283 (58%) | ||
MARCKS | 1434..1751 | CDD:280269 | 59/331 (18%) | ||
DUF1088 | 2791..2972 | CDD:284000 | 91/198 (46%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 58/96 (60%) | ||
Beach | 3125..3401 | CDD:280327 | 211/275 (77%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 20/35 (57%) | ||
WD40 | <3526..3729 | CDD:295369 | 104/205 (51%) | ||
WD40 | <3530..3773 | CDD:225201 | 120/245 (49%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 28/53 (53%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 20/34 (59%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 11/29 (38%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 15/34 (44%) | ||
Lrba | XP_006502410.1 | LamG | 229..376 | CDD:389952 | 93/146 (64%) |
DUF4704 | 446..717 | CDD:374111 | 164/284 (58%) | ||
DUF1088 | 1882..2061 | CDD:368928 | 91/195 (47%) | ||
PH_BEACH | 2087..2184 | CDD:373333 | 58/96 (60%) | ||
Beach | 2216..2492 | CDD:366934 | 211/275 (77%) | ||
WD40 repeat | 2608..2644 | CDD:293791 | 20/35 (57%) | ||
WD40 | <2613..2813 | CDD:392136 | 101/200 (51%) | ||
WD40 repeat | 2650..2703 | CDD:293791 | 28/53 (53%) | ||
WD40 repeat | 2708..2743 | CDD:293791 | 20/34 (59%) | ||
WD40 repeat | 2748..2777 | CDD:293791 | 11/28 (39%) | ||
WD40 repeat | 2784..2824 | CDD:293791 | 16/39 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 707 | 1.000 | Domainoid score | I122 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 2763 | 1.000 | Inparanoid score | I24 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46555 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002549 | |
OrthoInspector | 1 | 1.000 | - | - | otm42584 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103326 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13743 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2665 |
SonicParanoid | 1 | 1.000 | - | - | X1939 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.000 |