| Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002933545.3 | Gene: | lrba / 734030 | XenbaseID: | XB-GENE-951020 | Length: | 2809 | Species: | Xenopus tropicalis |
| Alignment Length: | 3776 | Identity: | 1502/3776 - (39%) |
|---|---|---|---|
| Similarity: | 2063/3776 - (54%) | Gaps: | 1024/3776 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 LKFAVLIGLIEVGQVTNREVVNTVLHLLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEI 91
Fly 92 WSVFIAILRKSVRNLQACTDVGLIEHVLVRLQRSETVVADLLIEMLGVLASYSITVKELKLLFGT 156
Fly 157 MKATNGKWPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSAMVLPPLAKWPYENGFTFTTWFRLD 221
Fly 222 PINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMIAIV 286
Fly 287 YIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATPELDEERVFCGQMSAIYLFSEA 351
Fly 352 LTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSHFQLLPATLGASALSGGSGSGTGSGTG 416
Fly 417 NDASAAAAAAVAAGQQQQLQLQFQILAAEQEARAIDWSDEKLDLNAAFVKIRAVLTARNAVTLAG 481
Fly 482 SSSTGTTAVATAAAAAAAAGAGAGTTAAATSAAAAAAATQNENDAAVGQQQHATHHHATAATGSA 546
Fly 547 DDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAVLYDGKLSNAIVFMYNP 611
Fly 612 VATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHE 676
Fly 677 GLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNL 741
Fly 742 TKYLVTCLSANSDLLLKQLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFLSDTQI 806
Fly 807 YSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIG 871
Fly 872 NGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAAESQL 936
Fly 937 IRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQI 1001
Fly 1002 LYTRHPEPESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMS 1066
Fly 1067 VWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFK 1131
Fly 1132 LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQTAAVKGSVS 1196
Fly 1197 IASLEDVPPVVEEEVEELELEEV-EIQEGPITEETEQKSVIANISDVYNEQLKTDATCNGNLEDV 1260
Fly 1261 KEEEPVQQQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRVLQASEA 1325
Fly 1326 ALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQGVLNNEKKTQSQDNKDNKEQPGEQDVNVSLL 1390
Fly 1391 NSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETETSVAPEVETPET 1455
Fly 1456 AKPSPIVPSPVLATNQKTEDAANKLNNNEKLAEISASPEPPIVVETPEADLLQLSDSETKPNKET 1520
Fly 1521 EAEDSVALAVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQTSEEPEDVETAETLAAA 1585
Fly 1586 AKEIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDL 1650
Fly 1651 KKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQVVAIVNQVLDTLVDDTVKA 1715
Fly 1716 VAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLLVEQVQQVLQED 1780
Fly 1781 DAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMFSPGPT 1845
Fly 1846 RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLDFVNSSENAIFVVNTVHLISQLA 1910
Fly 1911 DNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRLVNMADVLIFATSLNFGELEA 1975
Fly 1976 EKNMSSGGILRQCLRLVCTCAVRNCLECKERTRY-NVGALARDVPGAAHLQALIRGAQASPKNIV 2039
Fly 2040 ESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSLAIVYFISVLMVSKYRDILEPP 2104
Fly 2105 AEPQIQRQSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQNHNSNMQHQQQQQQQQQHQQQ 2169
Fly 2170 QHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTPLATHSTSSSASSTATSQPAS 2234
Fly 2235 SSSLSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGLINGHQQHPQLNGKHYAENG 2299
Fly 2300 STAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHGSGGTGNNNNSSLMNNMRNLRN 2364
Fly 2365 GGGANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMGGAVGVGMGGVAGGLDGGVVYKTSAINNN 2429
Fly 2430 YRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSVLADNDSHSSGPPSIKANQTTTIATTTTTTAT 2494
Fly 2495 THINNNNTKTTTSNAPTATIK-IQQQPLSPP--KPLV-PQKLPKSVDSDVGSLNMNSTENEVPEV 2555
Fly 2556 ESSSEILIDDHKPSHSNDESWTDVNLNEDAAVQAASAGIVVGLVDNRGNVISDKHDPSHHNQQQQ 2620
Fly 2621 QQAGIIGQQQQHGSLGHSERGDKPDSEISVVRVPDGYGGAGSGGGVNSGQGQGVPSNQRPRPEEL 2685
Fly 2686 PMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFAPFLSKTLVGSHGQELLMEGK 2750
Fly 2751 GLTTFKNSHSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILN 2815
Fly 2816 RMRADDVLKHADFESQCAQTLLERREEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWG 2880
Fly 2881 DSSSTSSGGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQ 2945
Fly 2946 TRDEFHTQIAVSRTHPSGQ-HNGELL----DDAELLIEDRELDLDLTGPVNISTKARLIAPGLVA 3005
Fly 3006 PGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLA 3070
Fly 3071 SRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNF 3135
Fly 3136 EYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERY 3200
Fly 3201 ESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLSWKNCQRD 3265
Fly 3266 TSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSC 3330
Fly 3331 QLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTPSQLLM 3395
Fly 3396 EPHPPRSSAMHLSPMMFSAMPE-DLCQMLKFYQNSPVIHISANTYPQLSLPSVVTVTAGHQFAVN 3459
Fly 3460 RWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNC 3524
Fly 3525 FVTTVDSRFLIACGFWDNSFRVFATETAKIVQIVFGHFGVVTCMARSECNITSDCYIASGSADCT 3589
Fly 3590 VLLWHWNARTQSIVGEGDVP-----TPRATLTGHEQAVTSVVISAELGLVVSGSSNGPVLIHTTF 3649
Fly 3650 GDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVAAYTINGKKLRHETHNDNLQCMLLSRDGE 3714
Fly 3715 YLMTAGDRGIVEVWRTFNLAPLYAFPACNAGIRSLALTHDQKYLLAGLSTGSIIVFHIDFNRWHH 3779
Fly 3780 EYQQRY 3785 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rg | NP_001284879.1 | Laminin_G_3 | 210..358 | CDD:463865 | 94/147 (64%) |
| DUF4704 | 629..1123 | CDD:464870 | 271/493 (55%) | ||
| PspC_subgroup_2 | <1433..1807 | CDD:468202 | 47/373 (13%) | ||
| DUF1088 | 2791..2972 | CDD:461925 | 92/185 (50%) | ||
| PH_BEACH | 2996..3093 | CDD:434260 | 57/96 (59%) | ||
| Beach | 3125..3401 | CDD:460459 | 207/275 (75%) | ||
| NBCH_WD40 | 3502..3774 | CDD:466575 | 134/276 (49%) | ||
| WD40 repeat | 3524..3560 | CDD:293791 | 21/35 (60%) | ||
| WD40 repeat | 3566..3617 | CDD:293791 | 29/55 (53%) | ||
| WD40 repeat | 3622..3657 | CDD:293791 | 20/34 (59%) | ||
| WD40 repeat | 3669..3699 | CDD:293791 | 12/29 (41%) | ||
| WD40 repeat | 3704..3739 | CDD:293791 | 17/34 (50%) | ||
| lrba | XP_002933545.3 | Neurobeachin | <60..192 | CDD:466574 | 78/131 (60%) |
| Laminin_G_3 | 224..371 | CDD:463865 | 93/146 (64%) | ||
| DUF4704 | 436..916 | CDD:464870 | 271/493 (55%) | ||
| MDN1 | 965..>1225 | CDD:444083 | 84/481 (17%) | ||
| DUF1088 | 1837..2004 | CDD:461925 | 92/182 (51%) | ||
| PH_BEACH | 2030..2127 | CDD:434260 | 57/96 (59%) | ||
| Beach | 2159..2435 | CDD:460459 | 207/275 (75%) | ||
| NBCH_WD40 | 2530..2794 | CDD:466575 | 132/266 (50%) | ||
| WD40 repeat | 2544..2582 | CDD:293791 | 22/37 (59%) | ||
| WD40 repeat | 2588..2641 | CDD:293791 | 29/55 (53%) | ||
| WD40 repeat | 2646..2681 | CDD:293791 | 20/34 (59%) | ||
| WD40 repeat | 2686..2715 | CDD:293791 | 11/28 (39%) | ||
| WD40 repeat | 2722..2762 | CDD:293791 | 19/39 (49%) |