Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_647681.2 | Gene: | mv / 38259 | FlyBaseID: | FBgn0265988 | Length: | 3535 | Species: | Drosophila melanogaster |
Alignment Length: | 3880 | Identity: | 760/3880 - (19%) |
---|---|---|---|
Similarity: | 1307/3880 - (33%) | Gaps: | 1217/3880 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 549 PLGHLPTGNASSSSSSFEQLRRMSSVSS------LNSMVGSADTEEVNQLKAVLYDGKLSNAIVF 607
Fly 608 MYNPVATDGQLCLQS--SPKGN------------VSYFVHTPHALMLQDVKAVVTHSIHCTLNSI 658
Fly 659 GGIQVLFPLFSQLDMAHEGLGDIKRDPTLCSKLL----GFICELVETSQTVQQHMIQNRGFLVIS 719
Fly 720 FMLQRSSRE-----HLTLEVLGSFLNLT-------KYLVTCLSANSDLLL--------------K 758
Fly 759 QLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFL--SDTQIYSNVRRVSTVLQTVH 821
Fly 822 TL---------KYYYWVV--------NPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIM 869
Fly 870 IGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMS-EHPSSMVPAFDVKHGVRSIFKLLAAE 933
Fly 934 SQLIRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHIS 998
Fly 999 QQILYTRHPE-PESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNREN---R 1059
Fly 1060 RTVLQMSVWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVD-------- 1116
Fly 1117 ----------------TL---AIVHSKVSYEEFKLQFAQMYEHYERQRTDNITDPALRQARPIST 1162
Fly 1163 ISGWEREELHQQQN-----------------------GGSAAAVATNQTAAVKGSVSIASLEDVP 1204
Fly 1205 PVVEEEVEELELEEVEIQEGPITEETEQKSVIANISDVYNEQLKTDATCNGNLEDVKEEEPVQ-- 1267
Fly 1268 -QQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRVLQ---------- 1321
Fly 1322 ASEAALNDCKMAVDDV----LQESSS-----VLKDEEIELAVNEVVQGVLNNE-KKTQSQDNK-- 1374
Fly 1375 --------DNKEQPGEQDVN--------VSLLNSKNLLNNN-------NNNNNNSPSPTPTTATA 1416
Fly 1417 TAETEAETEVNANEIVSSTEAPKAET-----ETSVAPEVETPETAKPSPIVPSPVLATNQKTEDA 1476
Fly 1477 ANKLNNNEKLAEISASPEPPIVVETPEADLLQLSDSETKPNKETEAEDSVALAVRDIVEQLIDKV 1541
Fly 1542 IDAT-EAESASETKTETNNNEIPKKEKQ-TSEEPEDVETAETLAAAAKE-IVQEVVEAALVMVQE 1603
Fly 1604 ESTQEKPEKGANSEEEKNEIGKEEILLQLEEK--------------------------PASTEVQ 1642
Fly 1643 ETKIE--GDLKKPEDPKGHSSVEPKTPNLEEPKP------------QETEQQKSQEVAE-ELPQK 1692
Fly 1693 PEEQVVAIVNQVLDTLVDDTVKAVAA-EQTTQTSPA--------PEEQSP-------------QI 1735
Fly 1736 LAMESPATSVRVKPTEVDSTTQTTPK--------NEAGSSLLVEQVQQVLQE--DDAQQSAGMTI 1790
Fly 1791 EDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQ---------------QRSKSGSTRPMF 1840
Fly 1841 SPGPTR-PPFRIPEFKWSYIHQRLLSDVLFSLE-----TDIQVW----RSHSTKSVLDFVNSSEN 1895
Fly 1896 AIFVVNTVHLISQLADNLIIACG-----GLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRL 1955
Fly 1956 VNMADVLIFATSL-----------------NFGELEAEKNMSSGGI---------LRQCLRLVCT 1994
Fly 1995 CAVRNCLECKERTRYNVGALARDVPGAAHLQALIRGAQASPKNIVESITGQLSPVKDPEKLL--- 2056
Fly 2057 ------------QDMDVNRLRAVIYRDVE---ETKQAQFLSLAIVYFISVLMVSKYRDILEPPAE 2106
Fly 2107 PQIQRQ------SPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQN----HNSNMQHQQQQQ 2161
Fly 2162 Q---------QQQHQQQQHYYQQQQ------------QQQVVHNHSHHHMTAAYYQQQQHQQVAA 2205
Fly 2206 ---GQQQ---------------HSPTP-LATHSTSSSASSTATSQPASSSSL-SSLASQSQQQSH 2250
Fly 2251 RQLHKQQQQ---QQQQQQQQQPHYHPHQPHY-GLINGHQQHPQLNGKHYAENGSTAGY------- 2304
Fly 2305 -----------HPHS----------------HPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGH 2342
Fly 2343 GSGGTGNNNNSSLMNNMRNLRNGGGANSSSS-------------PPGSHQVIQGVATAGAVNANA 2394
Fly 2395 AVGVGMGGAVGVGMGGVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDEN 2459
Fly 2460 NPSVLADNDSHSSGPPSIKANQTTTIATTT--TTTATTHINNNNTKTTTSNAPTATIKIQQQPLS 2522
Fly 2523 PPKPLVPQKL-PKSVDSDVGSLNMNSTENEVPEVES-----SSEIL--IDDHKPSHSN-DESWTD 2578
Fly 2579 V--NLNEDAAVQAASAGIVVGLVDNRGNVISDKHDP-------SHHNQQQQQQAGIIGQ------ 2628
Fly 2629 ----QQQHGSLGHSERGDKPDSEISVVRVPDGYG-GAGSGGGVN---SGQ---------GQGVPS 2676
Fly 2677 NQR-----------PRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFA 2730
Fly 2731 PFLSKTLVGSHGQELLMEGK------GLTTFKNSHSVVELVMLLC--------SQEWQNSLQKHA 2781
Fly 2782 GLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQT-------LLER 2839
Fly 2840 REEER---MCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYW 2901
Fly 2902 KLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHN 2966
Fly 2967 GEL---LDDAELLIE--DRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPE 3026
Fly 3027 FQKIDGEVLKY-CDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSILF------------- 3077
Fly 3078 -------AFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNF 3135
Fly 3136 EYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERY 3200
Fly 3201 ESWDSDT-------IPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLS 3258
Fly 3259 WKNCQRDT-SDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEE-FVRINRM 3321
Fly 3322 ALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDG-VLDPVMREAVENQIRN 3385
Fly 3386 FGQTPSQLLMEPHPPRSSAMHLSPMMFSAMPEDLCQMLK-----FYQNSPVI------------- 3432
Fly 3433 --HISA--NTYPQLSLPSVVTVTAGHQ---FAVNRWNCNYTASVQSPSYAESPQSPGSN--QPLT 3488
Fly 3489 IDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCF-------VTTVDSRFLIACGF---WDNS 3543
Fly 3544 FR--------------------VFATETAKIVQ------------------------IVFGHFGV 3564
Fly 3565 VTCMARS-ECNITSDCYIASGSADCTVLLWHWN--ARTQSIVGEGDVPTPRATLTGHEQAVTSVV 3626
Fly 3627 ISAELGLVVSGSSNGPVLIHTTFGDLLRSLD--PPAEFHSPELITMSRE----------GFIVIN 3679
Fly 3680 YD---KGNVAAYTINGKKLRHETHNDNL--QCMLLSRDG---EYLMTAGDRGIVEVWRTFNLAPL 3736
Fly 3737 YAFPACNAGIRSLAL-THDQKYLLAGLSTGSIIVFHIDFNRWHHE 3780 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | |
DUF4704 | 634..918 | CDD:292415 | 58/333 (17%) | ||
MARCKS | 1434..1751 | CDD:280269 | 65/387 (17%) | ||
DUF1088 | 2791..2972 | CDD:284000 | 28/193 (15%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 24/117 (21%) | ||
Beach | 3125..3401 | CDD:280327 | 135/285 (47%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 11/89 (12%) | ||
WD40 | <3526..3729 | CDD:295369 | 49/272 (18%) | ||
WD40 | <3530..3773 | CDD:225201 | 60/313 (19%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 9/53 (17%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 10/34 (29%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 6/42 (14%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 9/39 (23%) | ||
mv | NP_647681.2 | PH-like | 2704..2785 | CDD:418428 | 16/95 (17%) |
Beach | 2796..3080 | CDD:214982 | 135/285 (47%) | ||
WD40 | <3308..3507 | CDD:421866 | 47/220 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR13743 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |