DRSC/TRiP Functional Genomics Resources

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Protein Alignment rg and mv

DIOPT Version :9

Sequence 1:NP_001284879.1 Gene:rg / 44531 FlyBaseID:FBgn0266098 Length:3785 Species:Drosophila melanogaster
Sequence 2:NP_647681.2 Gene:mv / 38259 FlyBaseID:FBgn0265988 Length:3535 Species:Drosophila melanogaster


Alignment Length:3880 Identity:760/3880 - (19%)
Similarity:1307/3880 - (33%) Gaps:1217/3880 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 PLGHLPTGNASSSSSSFEQLRRMSSVSS------LNSMVGSADTEEVNQLKAVLYDGKLSNAIVF 607
            |...||...::...||||..|..:..|.      :..:....|.|:.:||...:::..|      
  Fly   210 PKSQLPNHISNPIKSSFEDFRGTTRSSDELALLLIQLLTRCVDAEQESQLSVTVHNFAL------ 268

  Fly   608 MYNPVATDGQLCLQS--SPKGN------------VSYFVHTPHALMLQDVKAVVTHSIHCTLNSI 658
                    |.||..|  ...||            :::.|:..:.|..|.      .::|...::.
  Fly   269 --------GHLCSSSEQDASGNNDELIKFELLQLIAHCVNNFYVLEQQQ------PNVHDFNSNF 319

  Fly   659 GGIQVLFPLFSQLDMAHEGLGDIKRDPTLCSKLL----GFICELVETSQTVQQHMIQNRGFLVIS 719
            |  |:|:.|.:.           :|.|.|...:|    |.:..||:.. ..:.:.|..|.|....
  Fly   320 G--QLLYALTAN-----------RRSPLLAHGVLYIMFGTLHNLVDNG-VRELNQIDVRNFDACF 370

  Fly   720 FMLQRSSRE-----HLTLEVLGSFLNLT-------KYLVTCLSANSDLLL--------------K 758
            .:||.:::.     .:.|.:....|.||       ::|.:.:.:::...:              .
  Fly   371 EVLQEAAKSTNFSTAIFLHIYKMLLRLTDNLSSQEQHLQSLMESSASTAMPKQQQHPRHKRQRSS 435

  Fly   759 QLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFL--SDTQIYSNVRRVSTVLQTVH 821
            ||.|....:..    ..|...|:...| :::|.|..:.....|  .....:.|||..:|.||...
  Fly   436 QLHCLGATSLS----CYFQGKLYHLLP-SLEAELQEHSVRSLLRTGSCCCHYNVRNYATCLQLAT 495

  Fly   822 TL---------KYYYWVV--------NPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIM 869
            .|         |:.::.|        ||:...|...| |..|               :|...|: 
  Fly   496 QLSSSYQKCAYKFLHYNVLHTIFVKRNPQGCPGCEDK-LKSP---------------VFHMDLL- 543

  Fly   870 IGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMS-EHPSSMVPAFDVKHGVRSIFKLLAAE 933
               .:.:|..:::||             ...||:.|.. :|.:.::| :|:..|:       .||
  Fly   544 ---NIYKDNYKALLN-------------TPAMLLFLKHLKHIAYLLP-YDLASGI-------LAE 584

  Fly   934 SQLIRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHIS 998
            ..|...:..|.|   :.....|||...::|                 |.||:....|..:.|.:|
  Fly   585 VALPIFRRYKEL---IESGESKRKISKVTP-----------------LQLPSKLENYRALHECLS 629

  Fly   999 QQILYTRHPE-PESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNREN---R 1059
            ..::|..... .::.|..||   ::.:..|:...:....:.|:.|:.:.::..|..:::|.   .
  Fly   630 IFVMYLSDIRLVKAFYNEEN---IRYMQDLLIIPELQRGVCDLIKVGIDNIAFLGENSQEQITLS 691

  Fly  1060 RTVLQMSVWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVD-------- 1116
            |.::|:.:                   ..||....||:.||:...||...  :.|:|        
  Fly   692 RRLIQLQL-------------------NSSDRASQLFQALLYKCSKHSRA--KFWLDESSTPAKL 735

  Fly  1117 ----------------TL---AIVHSKVSYEEFKLQFAQMYEHYERQRTDNITDPALRQARPIST 1162
                            ||   .:..|::.|.||...::...|..:.:..|.:..|.       |.
  Fly   736 EGHKPADILYITALQWTLNFELLKTSQLFYNEFAKIYSIPVEMLDDEDEDEVETPT-------SE 793

  Fly  1163 ISGWEREELHQQQN-----------------------GGSAAAVATNQTAAVKGSVSIASLEDVP 1204
            :...|::..|..:|                       |.:.::.||..||.:.||.|:.:|    
  Fly   794 LLPGEKKLRHGDKNIFDILKLNYNALGCFLMLPKATMGPTTSSTATTPTAGICGSSSLETL---- 854

  Fly  1205 PVVEEEVEELELEEVEIQEGPITEETEQKSVIANISDVYNEQLKTDATCNGNLEDVKEEEPVQ-- 1267
                            :.:.|:...|......|..|| |.:.....|:..||.:....:....  
  Fly   855 ----------------VSQLPLAGSTSVSVTTAASSD-YADSTLDYASVIGNYDSYSRDMATPSF 902

  Fly  1268 -QQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRVLQ---------- 1321
             ||:  |..:|:.||.|..:|.: |...|.....|.|.:.::...|:..::::..          
  Fly   903 LQQL--LACEPDESTVLFDIRGS-QSSKDNPSNSLILPSEEEGATADGIINKLFSIVGSLFGGSP 964

  Fly  1322 ASEAALNDCKMAVDDV----LQESSS-----VLKDEEIELAVNEVVQGVLNNE-KKTQSQDNK-- 1374
            .|..:.|....|..|.    |.|.:.     :||..|..:|:  .::|..|.| :|.|....|  
  Fly   965 GSGGSANSPTRANIDADFFCLYEPNGECKKLLLKLFEATMAI--CIKGFQNEEVEKMQKHLRKLR 1027

  Fly  1375 --------DNKEQPGEQDVN--------VSLLNSKNLLNNN-------NNNNNNSPSPTPTTATA 1416
                    ||..:.|||...        .:||....|.:.:       |:.:.:|..|.|...:.
  Fly  1028 AIILSHATDNWSEHGEQHARDNAVIQTLQTLLKIAELSSTHQEPTGVVNSPSGDSQQPRPRARSF 1092

  Fly  1417 TAETEAETEVNANEIVSSTEAPKAET-----ETSVAPEVETPETAKPSPIVPSPVLATNQKTEDA 1476
            .:              .|.|.|:.:|     :.|:|    ||.|.:..|                
  Fly  1093 NS--------------GSVELPRLQTVKLPAKNSLA----TPPTPRRRP---------------- 1123

  Fly  1477 ANKLNNNEKLAEISASPEPPIVVETPEADLLQLSDSETKPNKETEAEDSVALAVRDIVEQLIDKV 1541
                |::|..|.:.|.      ..:..|.|...:|||.:.: |.|.|..:.          .|:.
  Fly  1124 ----NSSEANAGVDAD------YFSTRASLSCAADSELELS-ENEHEFYLT----------ADEG 1167

  Fly  1542 IDAT-EAESASETKTETNNNEIPKKEKQ-TSEEPEDVETAETLAAAAKE-IVQEVVEAALVMVQE 1603
            .:|. |....||::.|.|...:...|.. |..:|.....:..:.....: :||.:.|.:|:.:::
  Fly  1168 YEADGEIADLSESECELNGGVLAANESTWTPFQPSSRYRSHIMHQGLSQLVVQMLAELSLLCIKQ 1232

  Fly  1604 ESTQEKPEKGANSEEEKNEIGKEEILLQLEEK--------------------------PASTEVQ 1642
            .:                  |..|.|.||..:                          |...|:|
  Fly  1233 PN------------------GWTESLTQLANRLFVIRDYLGGPLCLLKGFAPILSCSDPRLRELQ 1279

  Fly  1643 ETKIE--GDLKKPEDPKGHSSVEPKTPNLEEPKP------------QETEQQKSQEVAE-ELPQK 1692
            ::.:|  ..|..||..:.:.|:      |...:|            .....:|:|...| :.|..
  Fly  1280 QSILELVTHLNTPEVLQCYYSI------LASKQPPVDLLMRHMHHISSGSLRKAQPCMELDFPII 1338

  Fly  1693 PEEQVVAIVNQVLDTLVDDTVKAVAA-EQTTQTSPA--------PEEQSP-------------QI 1735
            .:.::|.    ..:.||.:.::.|.. .|..||:..        |..|:.             ::
  Fly  1339 TDGKIVV----TSEPLVSEQIERVRLHHQQCQTNTLFTRAACIFPVTQTRLWQPDGLTLSLWLEL 1399

  Fly  1736 LAMESPATSVRVKPTEVDSTTQTTPK--------NEAGSSLLVEQVQQVLQE--DDAQQSAGMTI 1790
            ...:...:|::....|...:.:...|        |:|..|:.:....|::.|  ...:|.|.:.:
  Fly  1400 RGQQMHRSSMQFNDDETRYSGEDLTKLHLLSLGTNQAMVSIYISNNMQLIFELVKPNEQLAPVRV 1464

  Fly  1791 EDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQ---------------QRSKSGSTRPMF 1840
            |::..:|...|:.:    |:...|.:.|......||.:               .::.:.||...|
  Fly  1465 EEQIEANADTASVI----SANTQAANGGTIRQALKQTKLALLNSFGQMHLLNGHQASADSTGGYF 1525

  Fly  1841 SPGPTR-PPFRIPEFKWSYIHQRLLSDVLFSLE-----TDIQVW----RSHSTKSVLDFVNSSEN 1895
            .....: ...|:|..||.::        :|.|:     .:|.::    ..|:.:  |.|.|..: 
  Fly  1526 ESSAVQLQHLRLPRHKWMHL--------VFGLQQQADSVEISIFLDGLEQHTMR--LPFRNLRQ- 1579

  Fly  1896 AIFVVNTVHLISQLADNLIIACG-----GLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRL 1955
                :..||...      ::|.|     |..|  .|::|..|.||...|...  |...:.|.:||
  Fly  1580 ----LTRVHSFQ------LLALGEGQPTGRSP--GSSSSSRSTLDGSTPRYA--LSNVILFKRRL 1630

  Fly  1956 VNMADVLIFATSL-----------------NFGELEAEKNMSSGGI---------LRQCLRLVCT 1994
            |:.. :::..|::                 |:|.:...| :||...         |||...||.|
  Fly  1631 VDPL-LMMNLTAMGPDFTEFTQCQVANWKPNYGFVSLGK-LSSSNFGNHLDCMRQLRQARVLVYT 1693

  Fly  1995 CAVRNCLECKERTRYNVGALARDVPGAAHLQALIRGAQASPKNIVESITGQLSPVKDPEKLL--- 2056
            ....:.:...:.:: .:.......|....|...::..||.......|::|.||      .||   
  Fly  1694 AQQPDLVMSYDASQ-ELDMACYGQPHGHMLYGELQQHQAQTLQAATSLSGGLS------TLLYLF 1751

  Fly  2057 ------------QDMDVNRLRAVIYRDVE---ETKQAQFLSLAIVYFISVLMVSKYRDILEPPAE 2106
                        |.:.::.|..|.:.|.:   |.::..:||| |.|.|.....||         :
  Fly  1752 ARIVELTGNASTQALALDLLLQVAHSDAQLYTEFQRQDYLSL-IGYVIKSEKCSK---------D 1806

  Fly  2107 PQIQRQ------SPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQN----HNSNMQHQQQQQ 2161
            .|:.|.      |.|| .|..|::.:...  ...:..|||:.:....|.    |.|...|.....
  Fly  1807 VQLLRSIVNNACSQVL-ITRKGDSINVND--NTMATLVYPRLMLTVLQRYSDWHRSGATHSDVLD 1868

  Fly  2162 Q---------QQQHQQQQHYYQQQQ------------QQQVVHNHSHHHMTAAYYQQQQHQQVAA 2205
            .         :.:|.|:....:|.|            :..|:.:.|...::.  |..:...|:.|
  Fly  1869 MLFRCILALTRDKHPQRDFNMEQLQKCGLLGALLNLCKVYVIESPSPVQISP--YAAECFVQILA 1931

  Fly  2206 ---GQQQ---------------HSPTP-LATHSTSSSASSTATSQPASSSSL-SSLASQSQQQSH 2250
               |...               |.|:. ..||..:.........||....|| ::..|:......
  Fly  1932 VFSGSPPDSSMLDEIMKLLLLLHKPSDCYVTHDRTHFYFLLTAQQPTKERSLVAANLSRVTTSLR 1996

  Fly  2251 RQLHKQQQQ---QQQQQQQQQPHYHPHQPHY-GLINGHQQHPQLNGKHYAENGSTAGY------- 2304
            ||||.|.|:   ::.::.::....|.....| ..:|..::|  |:......|.:.:..       
  Fly  1997 RQLHPQPQELDPERAERIKKLRRLHASTSGYRKAVNEFEEH--LDQMADCSNLNKSALRLLSPVE 2059

  Fly  2305 -----------HPHS----------------HPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGH 2342
                       ||.|                |||.|.|                   .:...:||
  Fly  2060 ATRWRLKFKRRHPTSANSPKRSPLKIARRRIHPHLHLG-------------------KIWQPSGH 2105

  Fly  2343 GSGGTGNNNNSSLMNNMRNLRNGGGANSSSS-------------PPGSHQVIQGVATAGAVNANA 2394
            .:..:|   .|||.|...:..:..|......             |..|..|:    |...|....
  Fly  2106 STPSSG---QSSLPNRKTDFYDQLGIIRLQQRLLILLKDFLCLLPDSSVDVV----TRHYVKLEL 2163

  Fly  2395 AVGVGMGGAVGVGMGGVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDEN 2459
            .:.:.                                 |.|:.:......|:.|      |:.:.
  Fly  2164 LLVLA---------------------------------NQRSCAVRQAIIQLVD------VLTKR 2189

  Fly  2460 NPSVLADNDSHSSGPPSIKANQTTTIATTT--TTTATTHINNNNTKTTTSNAPTATIKIQQQPLS 2522
            .||...:..:....|..: |||.|......  .......||..:...|...:..|.::|:|:...
  Fly  2190 LPSGELNAATKLMHPLHL-ANQLTIHGCDVGMFEACLAWINGMHCSLTDIQSCDAPVRIRQRFGL 2253

  Fly  2523 PPKPLVPQKL-PKSVDSDVGSLNMNSTENEVPEVES-----SSEIL--IDDHKPSHSN-DESWTD 2578
            |....:.:.. |:.|...:..|.:.:.:::...:|:     |.:.|  |...:...|| |||..:
  Fly  2254 PSLLAIAEGTEPQWVFKALLRLYLQNPDDQTCLIEAGLLQCSVKALYKIYSLRVGQSNADESVVE 2318

  Fly  2579 V--NLNEDAAVQAASAGIVVGLVDNRGNVISDKHDP-------SHHNQQQQQQAGIIGQ------ 2628
            :  .:.|.|........:|..::    |::|...|.       |....|.|.|...:.:      
  Fly  2319 LLATIGERAMRSVGQINLVWDIL----NLLSFYQDKQPQLIMRSFRTAQAQLQLEWLTKFFEPNS 2379

  Fly  2629 ----QQQHGSLGHSERGDKPDSEISVVRVPDGYG-GAGSGGGVN---SGQ---------GQGVPS 2676
                .....||.|||.  :...|:.:.|....:. |.|...|.|   |.|         ..|:.|
  Fly  2380 FRVAVTNDSSLSHSEL--RTRVELLIDRCTQFFTVGVGQTTGPNYVASSQELALFQLLVSYGISS 2442

  Fly  2677 NQR-----------PRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFA 2730
            |||           .||.:                                     ||..:||  
  Fly  2443 NQRCNNFIAWGLQPSRPRD-------------------------------------LRSYIVD-- 2468

  Fly  2731 PFLSKTLVGSHGQELLMEGK------GLTTFKNSHSVVELVMLLC--------SQEWQNSLQKHA 2781
             .|.::......:.::.:.|      .|:..::....:|.:..||        ...|        
  Fly  2469 -ALWRSQQDEFQRAIICDAKMIKALLWLSLLEDMPEPIENLKPLCDALGIKENDSSW-------- 2524

  Fly  2782 GLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQT-------LLER 2839
                 .|::|...|.....:    :|.:.:.:|.:    .|.:......||.::       :.|.
  Fly  2525 -----NLVHELDRLDQNRNN----MAAKQKTLLEK----TVYRFEPLVQQCVESSMVTTRKVAEL 2576

  Fly  2840 REEER---MCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYW 2901
            :..||   ||...:    ..|....::.||.:|.:             |..|.....|.:....|
  Fly  2577 QNAERKALMCHMKV----YDDTYTYTKWLEIIRRM-------------THEGAPWHSAERAECSW 2624

  Fly  2902 KLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHN 2966
            :||..|..:|...|                           :.:...:...:..::...|...|.
  Fly  2625 ELDDTEGPSRVHTR---------------------------LRRCHLDIDRRFFMNEYRPGQGHR 2662

  Fly  2967 GEL---LDDAELLIE--DRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPE 3026
            .:|   :...:.||.  |::|::.|...:..:..|:.:.......|.:.||..:::|        
  Fly  2663 EDLEPYVRPLDYLIASYDQQLNISLNSQILYNFAAKFLPVDGEIEGEIIITDLKLYF-------- 2719

  Fly  3027 FQKIDGEVLKY-CDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSILF------------- 3077
                   :..| |.:.:.....:.:..|:.:||..|..|.||.|.:..|:.|             
  Fly  2720 -------LATYRCRYFNVNCDIANITEIWLKRYQHQETAFEILLDTNKSLFFSLQNADDWKIMRE 2777

  Fly  3078 -------AFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNF 3135
                   |.|||   .|||.                                :||:|:...::|:
  Fly  2778 VFCDKIVATPDQ---SKVIA--------------------------------ITQQWREGLLTNW 2807

  Fly  3136 EYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERY 3200
            ||||.||.|:|||||||.|||:|||||.||.|:.|||....|:|.|.:||.........::...|
  Fly  2808 EYLMTLNQISGRTYNDLMQYPVFPWVLANYNSEVLDLREGHNFRRLGRPIAVQVEENEKHYISNY 2872

  Fly  3201 ESWDSDT-------IPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLS 3258
            ...||..       :.|:||.:|||.:...|::||||.|||:.||..|...||.|||.|.:::.:
  Fly  2873 TYIDSTNTTMGSLILKPYHYSSHYSNSGTVLHFLVRVPPFTSYFLRYQDNDFDLPDRTFHALNTT 2937

  Fly  3259 WKNCQRDT-SDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEE-FVRINRM 3321
            |....||: :||||||||::.|||||.|...::.|.|::|..|:|:.||||::.... ||.|:|.
  Fly  2938 WLLASRDSPTDVKELIPEFFCLPEMFENFERFKFGCRQNGERVEDVSLPPWSQRDSRLFVLIHRQ 3002

  Fly  3322 ALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDG-VLDPVMREAVENQIRN 3385
            |||||.|..|:|.||||||||||.|..|:.|.|||:..||  :|.||. :.||:.||||:..::.
  Fly  3003 ALESELVRNQIHNWIDLIFGYKQSGESAVEAINVFHPATY--AVFLDSEISDPIEREAVKTMVKT 3065

  Fly  3386 FGQTPSQLLMEPHPPRSSAMHLSPMMFSAMPEDLCQMLK-----FYQNSPVI------------- 3432
            :||.|.||...|||..      .|:.:|.:.:.:...::     .|..||.:             
  Fly  3066 YGQMPRQLFKSPHPAS------KPLDYSLVGKPIVSTVRGLRWGVYVGSPQLKAPSWANIHKIPG 3124

  Fly  3433 --HISA--NTYPQLSLPSVVTVTAGHQ---FAVNRWNCNYTASVQSPSYAESPQSPGSN--QPLT 3488
              |:.:  ||....:||...:|..|.:   :.|..|  .|...:........||:...|  ...|
  Fly  3125 TEHLVSFCNTNVVYALPGRASVMQGAEPDTYNVISW--GYDDRIVRIQPLNKPQAKPKNLLHNGT 3187

  Fly  3489 IDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCF-------VTTVDSRFLIACGF---WDNS 3543
            .|.:.|. |.:.|||.....|.....|..     .|.       ..:..||...|.||   ::::
  Fly  3188 FDDITAC-GCDVNSNQLWFGHKSGRISVY-----KCTGGLDSQQRASAKSRQSYARGFSLSYNSA 3246

  Fly  3544 FR--------------------VFATETAKIVQ------------------------IVFGHFGV 3564
            ||                    :..|.:|..|.                        ::..|...
  Fly  3247 FRKMTNKGIGGGGSERVDEAGNLHPTSSASSVNSSSISSGGDAFQRDGADLNWLGPTLLVRHTDE 3311

  Fly  3565 VTCMARS-ECNITSDCYIASGSADCTVLLWHWN--ARTQSIVGEGDVPTPRATLTGHEQAVTSVV 3626
            :||:..| |..|.     .:...|...::|..|  :..::|....::         |:..:|.|.
  Fly  3312 ITCITLSVEFKIA-----VTAGRDGIAVIWDLNDWSYVRTIARPAEI---------HQSPITHVA 3362

  Fly  3627 ISAELGLVVSGSSNGPVLIHTTFGDLLRSLD--PPAEFHSPELITMSRE----------GFIVIN 3679
            ||..||.:|:        :||.......|.|  |.|....|..:.::.|          .|:.:|
  Fly  3363 ISPTLGDIVT--------VHTLPQSCNTSTDPKPTAVATRPNSLNVADECFEVTEENLDDFVNVN 3419

  Fly  3680 YD---KGNVAAYTINGKKLRHETHNDNL--QCMLLSRDG---EYLMTAGDRGIVEVWRTFNLAPL 3736
            .:   |..:..:::|.:.::|..|.|.:  .|....::|   ..:.||.:.|.|..|.::||:.:
  Fly  3420 VNPNGKSILRLHSVNARYVQHLVHEDRILAVCYSYIKEGVGVNVIATAVEGGFVRFWSSWNLSFV 3484

  Fly  3737 YAFPACNAGIRSLAL-THDQKYLLAGLSTGSIIVFHIDFNRWHHE 3780
            .......:.|||:.. ||....:|...|       ||..  |..|
  Fly  3485 SELTTGTSPIRSICYSTHQHLVVLTRES-------HIQV--WESE 3520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgNP_001284879.1 LamG 210..358 CDD:304605
DUF4704 634..918 CDD:292415 58/333 (17%)
MARCKS 1434..1751 CDD:280269 65/387 (17%)
DUF1088 2791..2972 CDD:284000 28/193 (15%)
PH_BEACH 2996..3093 CDD:291510 24/117 (21%)
Beach 3125..3401 CDD:280327 135/285 (47%)
WD40 repeat 3524..3560 CDD:293791 11/89 (12%)
WD40 <3526..3729 CDD:295369 49/272 (18%)
WD40 <3530..3773 CDD:225201 60/313 (19%)
WD40 repeat 3566..3617 CDD:293791 9/53 (17%)
WD40 repeat 3622..3657 CDD:293791 10/34 (29%)
WD40 repeat 3669..3699 CDD:293791 6/42 (14%)
WD40 repeat 3704..3739 CDD:293791 9/39 (23%)
mvNP_647681.2 PH-like 2704..2785 CDD:418428 16/95 (17%)
Beach 2796..3080 CDD:214982 135/285 (47%)
WD40 <3308..3507 CDD:421866 47/220 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13743
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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